Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 24 studies | 33% ± 13% | |
fibroblast | 17 studies | 27% ± 9% | |
astrocyte | 16 studies | 36% ± 18% | |
microglial cell | 16 studies | 59% ± 14% | |
oligodendrocyte precursor cell | 14 studies | 41% ± 16% | |
pericyte | 13 studies | 24% ± 9% | |
ciliated cell | 13 studies | 31% ± 13% | |
glutamatergic neuron | 12 studies | 72% ± 25% | |
smooth muscle cell | 11 studies | 24% ± 8% | |
GABAergic neuron | 10 studies | 65% ± 24% | |
macrophage | 10 studies | 29% ± 12% | |
B cell | 10 studies | 20% ± 5% | |
adipocyte | 10 studies | 32% ± 9% | |
basal cell | 9 studies | 37% ± 18% | |
neuron | 8 studies | 38% ± 21% | |
amacrine cell | 8 studies | 50% ± 20% | |
epithelial cell | 8 studies | 45% ± 26% | |
non-classical monocyte | 7 studies | 21% ± 6% | |
myeloid cell | 7 studies | 24% ± 5% | |
retinal cone cell | 7 studies | 52% ± 21% | |
retinal rod cell | 7 studies | 57% ± 29% | |
mast cell | 7 studies | 21% ± 3% | |
oligodendrocyte | 7 studies | 34% ± 19% | |
interneuron | 6 studies | 58% ± 33% | |
retinal ganglion cell | 6 studies | 89% ± 16% | |
club cell | 6 studies | 28% ± 9% | |
endothelial cell of lymphatic vessel | 6 studies | 29% ± 7% | |
type I pneumocyte | 6 studies | 21% ± 6% | |
retinal bipolar neuron | 5 studies | 31% ± 13% | |
OFF-bipolar cell | 5 studies | 63% ± 29% | |
plasma cell | 5 studies | 31% ± 11% | |
retina horizontal cell | 5 studies | 25% ± 11% | |
myofibroblast cell | 5 studies | 26% ± 10% | |
monocyte | 5 studies | 30% ± 8% | |
type II pneumocyte | 5 studies | 25% ± 6% | |
plasmacytoid dendritic cell | 5 studies | 23% ± 8% | |
granule cell | 4 studies | 64% ± 17% | |
GABAergic amacrine cell | 4 studies | 60% ± 28% | |
dendritic cell | 4 studies | 23% ± 6% | |
mesothelial cell | 4 studies | 33% ± 12% | |
Mueller cell | 4 studies | 28% ± 13% | |
ON-bipolar cell | 4 studies | 54% ± 30% | |
endothelial cell of vascular tree | 4 studies | 23% ± 10% | |
abnormal cell | 4 studies | 22% ± 10% | |
connective tissue cell | 4 studies | 23% ± 5% | |
T cell | 4 studies | 19% ± 4% | |
kidney loop of Henle epithelial cell | 4 studies | 46% ± 28% | |
endothelial cell of sinusoid | 3 studies | 27% ± 7% | |
classical monocyte | 3 studies | 22% ± 1% | |
hematopoietic precursor cell | 3 studies | 23% ± 5% | |
plasmablast | 3 studies | 29% ± 10% | |
GABAergic interneuron | 3 studies | 61% ± 31% | |
glial cell | 3 studies | 22% ± 5% | |
squamous epithelial cell | 3 studies | 38% ± 18% | |
serous secreting cell | 3 studies | 26% ± 7% | |
mononuclear phagocyte | 3 studies | 20% ± 1% | |
vein endothelial cell | 3 studies | 30% ± 17% | |
lymphocyte | 3 studies | 24% ± 7% | |
glycinergic amacrine cell | 3 studies | 46% ± 21% | |
rod bipolar cell | 3 studies | 40% ± 17% | |
hepatocyte | 3 studies | 33% ± 12% | |
muscle cell | 3 studies | 31% ± 19% | |
alveolar macrophage | 3 studies | 32% ± 7% | |
respiratory goblet cell | 3 studies | 39% ± 13% | |
goblet cell | 3 studies | 39% ± 25% | |
transit amplifying cell | 3 studies | 45% ± 33% | |
naive B cell | 3 studies | 18% ± 2% | |
mucus secreting cell | 3 studies | 44% ± 13% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 18 studies | 45% ± 24% | |
eye | 9 studies | 46% ± 22% | |
lung | 9 studies | 22% ± 6% | |
heart | 4 studies | 19% ± 2% | |
peripheral blood | 3 studies | 18% ± 1% | |
liver | 3 studies | 27% ± 9% | |
intestine | 3 studies | 21% ± 5% | |
adipose | 3 studies | 39% ± 13% | |
kidney | 3 studies | 53% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3141.07 | 1445 / 1445 | 100% | 24.61 | 183 / 183 |
breast | 100% | 3621.36 | 459 / 459 | 99% | 32.81 | 1110 / 1118 |
lung | 99% | 2188.20 | 572 / 578 | 99% | 23.67 | 1149 / 1155 |
brain | 99% | 4518.63 | 2607 / 2642 | 99% | 33.38 | 700 / 705 |
ovary | 100% | 2739.74 | 180 / 180 | 97% | 19.99 | 418 / 430 |
bladder | 100% | 2889.71 | 21 / 21 | 97% | 22.98 | 489 / 504 |
kidney | 100% | 2181.75 | 89 / 89 | 97% | 31.27 | 870 / 901 |
thymus | 100% | 2344.30 | 651 / 653 | 97% | 23.53 | 585 / 605 |
intestine | 100% | 2632.08 | 966 / 966 | 96% | 20.23 | 507 / 527 |
stomach | 100% | 2366.53 | 359 / 359 | 96% | 20.85 | 274 / 286 |
uterus | 99% | 2672.02 | 169 / 170 | 96% | 22.07 | 439 / 459 |
prostate | 100% | 2245.50 | 245 / 245 | 94% | 16.25 | 474 / 502 |
adrenal gland | 100% | 8102.97 | 258 / 258 | 93% | 21.99 | 213 / 230 |
pancreas | 91% | 1149.67 | 300 / 328 | 98% | 20.30 | 175 / 178 |
skin | 100% | 3865.57 | 1806 / 1809 | 84% | 17.02 | 398 / 472 |
liver | 92% | 1113.52 | 208 / 226 | 84% | 12.28 | 341 / 406 |
muscle | 100% | 2998.85 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2045.91 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 9.62 | 1 / 1 |
blood vessel | 100% | 4106.61 | 1334 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 3440.50 | 1203 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 25.29 | 44 / 45 |
heart | 91% | 1775.70 | 787 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 59% | 10.75 | 47 / 80 |
lymph node | 0% | 0 | 0 / 0 | 59% | 4.80 | 17 / 29 |
peripheral blood | 54% | 1258.65 | 501 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_1902083 | Biological process | negative regulation of peptidyl-cysteine S-nitrosylation |
GO_0051402 | Biological process | neuron apoptotic process |
GO_0007628 | Biological process | adult walking behavior |
GO_0043524 | Biological process | negative regulation of neuron apoptotic process |
GO_0006979 | Biological process | response to oxidative stress |
GO_0071447 | Biological process | cellular response to hydroperoxide |
GO_1900408 | Biological process | negative regulation of cellular response to oxidative stress |
GO_0005730 | Cellular component | nucleolus |
GO_0005739 | Cellular component | mitochondrion |
GO_0005634 | Cellular component | nucleus |
GO_0016491 | Molecular function | oxidoreductase activity |
GO_0003674 | Molecular function | molecular_function |
Gene name | OXR1 |
Protein name | Oxidation resistance 1 Oxidation resistance protein 1 |
Synonyms | Nbla00307 |
Description | FUNCTION: May be involved in protection from oxidative damage. . |
Accessions | C9JY63 ENST00000531443.6 [Q8N573-5] ENST00000442977.6 [Q8N573-1] E9PLW2 ENST00000497705.5 [Q8N573-3] E5RFD1 Q05CY8 E5RII8 ENST00000449762.6 [Q8N573-7] H0YC07 Q8N573 ENST00000312046.10 [Q8N573-2] ENST00000438229.6 ENST00000517566.7 [Q8N573-8] ENST00000521592.5 ENST00000517686.5 ENST00000435082.1 ENST00000297447.10 [Q8N573-4] ENST00000519415.6 |