Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 20 studies | 34% ± 14% | |
endothelial cell | 20 studies | 32% ± 15% | |
smooth muscle cell | 17 studies | 30% ± 10% | |
astrocyte | 17 studies | 37% ± 17% | |
pericyte | 17 studies | 26% ± 12% | |
oligodendrocyte | 15 studies | 45% ± 19% | |
macrophage | 11 studies | 32% ± 14% | |
microglial cell | 11 studies | 32% ± 12% | |
GABAergic neuron | 10 studies | 45% ± 23% | |
glutamatergic neuron | 9 studies | 40% ± 26% | |
oligodendrocyte precursor cell | 9 studies | 35% ± 13% | |
epithelial cell | 9 studies | 41% ± 17% | |
ciliated cell | 9 studies | 27% ± 10% | |
type I pneumocyte | 9 studies | 29% ± 8% | |
myofibroblast cell | 8 studies | 28% ± 8% | |
adipocyte | 8 studies | 33% ± 11% | |
type II pneumocyte | 7 studies | 26% ± 7% | |
mast cell | 7 studies | 26% ± 6% | |
endothelial cell of lymphatic vessel | 7 studies | 33% ± 13% | |
interneuron | 6 studies | 55% ± 23% | |
retinal ganglion cell | 6 studies | 33% ± 17% | |
B cell | 6 studies | 19% ± 4% | |
club cell | 6 studies | 31% ± 10% | |
retinal cone cell | 6 studies | 39% ± 16% | |
myeloid cell | 6 studies | 24% ± 5% | |
basal cell | 6 studies | 32% ± 17% | |
dendritic cell | 6 studies | 24% ± 10% | |
hepatocyte | 5 studies | 58% ± 26% | |
kidney loop of Henle epithelial cell | 5 studies | 24% ± 3% | |
connective tissue cell | 5 studies | 22% ± 5% | |
retinal bipolar neuron | 5 studies | 47% ± 15% | |
neuron | 5 studies | 48% ± 17% | |
amacrine cell | 5 studies | 29% ± 10% | |
retina horizontal cell | 5 studies | 31% ± 11% | |
retinal rod cell | 5 studies | 29% ± 9% | |
cardiac muscle cell | 5 studies | 44% ± 11% | |
Mueller cell | 5 studies | 34% ± 15% | |
monocyte | 5 studies | 23% ± 4% | |
granule cell | 4 studies | 24% ± 6% | |
retinal pigment epithelial cell | 4 studies | 43% ± 10% | |
mesothelial cell | 4 studies | 29% ± 7% | |
lymphocyte | 4 studies | 26% ± 9% | |
OFF-bipolar cell | 4 studies | 29% ± 14% | |
ON-bipolar cell | 4 studies | 34% ± 15% | |
muscle cell | 4 studies | 41% ± 20% | |
goblet cell | 4 studies | 34% ± 28% | |
plasmacytoid dendritic cell | 4 studies | 22% ± 4% | |
plasmablast | 3 studies | 29% ± 13% | |
GABAergic interneuron | 3 studies | 37% ± 1% | |
glial cell | 3 studies | 32% ± 9% | |
progenitor cell | 3 studies | 36% ± 11% | |
plasma cell | 3 studies | 35% ± 5% | |
CD4-positive, alpha-beta T cell | 3 studies | 16% ± 1% | |
mononuclear phagocyte | 3 studies | 19% ± 4% | |
GABAergic amacrine cell | 3 studies | 34% ± 14% | |
glycinergic amacrine cell | 3 studies | 25% ± 2% | |
rod bipolar cell | 3 studies | 84% ± 11% | |
endothelial cell of vascular tree | 3 studies | 29% ± 16% | |
ependymal cell | 3 studies | 45% ± 18% | |
T cell | 3 studies | 21% ± 2% | |
alveolar macrophage | 3 studies | 26% ± 6% | |
chondrocyte | 3 studies | 29% ± 11% | |
melanocyte | 3 studies | 53% ± 32% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 4152.34 | 1445 / 1445 | 100% | 24.31 | 183 / 183 |
lung | 100% | 6877.11 | 578 / 578 | 100% | 29.58 | 1155 / 1155 |
ovary | 100% | 7528.87 | 180 / 180 | 100% | 25.76 | 430 / 430 |
breast | 100% | 7049.07 | 459 / 459 | 100% | 30.82 | 1116 / 1118 |
prostate | 100% | 6733.83 | 245 / 245 | 100% | 32.94 | 501 / 502 |
kidney | 100% | 5581.00 | 89 / 89 | 100% | 32.44 | 898 / 901 |
bladder | 100% | 5404.52 | 21 / 21 | 99% | 24.36 | 501 / 504 |
thymus | 100% | 6279.61 | 653 / 653 | 99% | 33.39 | 601 / 605 |
intestine | 100% | 4652.30 | 966 / 966 | 99% | 18.94 | 523 / 527 |
skin | 100% | 4244.36 | 1809 / 1809 | 99% | 44.15 | 468 / 472 |
pancreas | 100% | 3320.43 | 328 / 328 | 99% | 24.58 | 176 / 178 |
stomach | 100% | 5002.23 | 359 / 359 | 99% | 19.47 | 282 / 286 |
uterus | 100% | 7233.68 | 170 / 170 | 98% | 24.67 | 452 / 459 |
adrenal gland | 100% | 6747.09 | 258 / 258 | 98% | 17.22 | 225 / 230 |
liver | 100% | 5173.09 | 226 / 226 | 97% | 24.88 | 394 / 406 |
brain | 99% | 2796.83 | 2604 / 2642 | 97% | 18.59 | 686 / 705 |
adipose | 100% | 5877.27 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 9237.21 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 19.23 | 29 / 29 |
spleen | 100% | 5446.74 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 16.39 | 1 / 1 |
muscle | 100% | 7226.31 | 801 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 40.10 | 79 / 80 |
heart | 97% | 4335.63 | 836 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 19.57 | 43 / 45 |
peripheral blood | 95% | 5818.99 | 884 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006699 | Biological process | bile acid biosynthetic process |
GO_0006869 | Biological process | lipid transport |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0031902 | Cellular component | late endosome membrane |
GO_0005829 | Cellular component | cytosol |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0016020 | Cellular component | membrane |
GO_0032934 | Molecular function | sterol binding |
GO_0005515 | Molecular function | protein binding |
Gene name | OSBPL9 |
Protein name | Oxysterol binding protein like 9 OSBPL9 protein Alternative protein OSBPL9 Oxysterol-binding protein Oxysterol-binding protein-related protein 9 (ORP-9) (OSBP-related protein 9) |
Synonyms | OSBP4 hCG_1780933 ORP9 |
Description | |
Accessions | ENST00000489990.5 ENST00000361556.9 [Q96SU4-3] E9PNR1 ENST00000532975.5 ENST00000447887.5 [Q96SU4-6] ENST00000481937.5 ENST00000625138.1 Q96SU4 H0YE19 L8EBE2 G8JLK0 A0A096LPC8 ENST00000453295.5 [Q96SU4-7] ENST00000533884.5 ENST00000534040.5 H0YE93 H0YDB5 B1AKJ6 E9PKX6 ENST00000435274.6 ENST00000371714.5 [Q96SU4-2] ENST00000495776.5 E9PLH0 B3KW33 Q9BRN2 ENST00000531061.1 ENST00000527631.5 ENST00000528603.5 E9PK98 ENST00000428468.6 [Q96SU4-1] E9PJ80 ENST00000462759.5 [Q96SU4-5] H0YCW0 ENST00000526917.5 ENST00000486942.5 [Q96SU4-5] ENST00000531828.5 [Q96SU4-4] |