Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 14 studies | 46% ± 24% | |
oligodendrocyte | 14 studies | 73% ± 18% | |
glutamatergic neuron | 12 studies | 76% ± 27% | |
GABAergic neuron | 11 studies | 81% ± 21% | |
oligodendrocyte precursor cell | 11 studies | 56% ± 19% | |
endothelial cell | 10 studies | 49% ± 22% | |
microglial cell | 10 studies | 44% ± 18% | |
amacrine cell | 8 studies | 66% ± 32% | |
neuron | 7 studies | 46% ± 24% | |
interneuron | 7 studies | 80% ± 26% | |
retinal ganglion cell | 7 studies | 61% ± 22% | |
endothelial cell of lymphatic vessel | 7 studies | 27% ± 8% | |
smooth muscle cell | 6 studies | 24% ± 10% | |
retina horizontal cell | 6 studies | 74% ± 33% | |
Mueller cell | 6 studies | 47% ± 22% | |
retinal bipolar neuron | 5 studies | 65% ± 29% | |
glial cell | 5 studies | 42% ± 25% | |
type I pneumocyte | 5 studies | 22% ± 3% | |
type II pneumocyte | 5 studies | 33% ± 5% | |
granule cell | 4 studies | 72% ± 32% | |
ciliated cell | 4 studies | 33% ± 5% | |
OFF-bipolar cell | 4 studies | 84% ± 20% | |
ON-bipolar cell | 4 studies | 81% ± 26% | |
retinal cone cell | 4 studies | 37% ± 3% | |
club cell | 4 studies | 32% ± 10% | |
GABAergic interneuron | 3 studies | 78% ± 20% | |
GABAergic amacrine cell | 3 studies | 99% ± 2% | |
glycinergic amacrine cell | 3 studies | 98% ± 2% | |
rod bipolar cell | 3 studies | 80% ± 28% | |
respiratory goblet cell | 3 studies | 42% ± 24% | |
Schwann cell | 3 studies | 73% ± 26% | |
fibroblast | 3 studies | 20% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 97% | 7350.26 | 2567 / 2642 | 81% | 5.66 | 573 / 705 |
prostate | 77% | 1102.83 | 189 / 245 | 66% | 1.81 | 329 / 502 |
bladder | 71% | 810.81 | 15 / 21 | 42% | 1.69 | 214 / 504 |
intestine | 78% | 3050.30 | 750 / 966 | 36% | 1.25 | 188 / 527 |
esophagus | 67% | 3782.46 | 971 / 1445 | 31% | 1.11 | 56 / 183 |
lung | 36% | 305.30 | 206 / 578 | 52% | 2.06 | 598 / 1155 |
stomach | 43% | 1743.86 | 155 / 359 | 42% | 2.18 | 121 / 286 |
adrenal gland | 10% | 140.58 | 27 / 258 | 67% | 7.52 | 153 / 230 |
kidney | 12% | 98.84 | 11 / 89 | 64% | 3.39 | 576 / 901 |
uterus | 51% | 845.17 | 87 / 170 | 23% | 1.17 | 106 / 459 |
blood vessel | 52% | 729.58 | 695 / 1335 | 0% | 0 | 0 / 0 |
ovary | 9% | 70.96 | 17 / 180 | 40% | 0.97 | 170 / 430 |
breast | 9% | 63.83 | 41 / 459 | 29% | 0.95 | 324 / 1118 |
skin | 1% | 7.47 | 19 / 1809 | 30% | 1.41 | 143 / 472 |
pancreas | 2% | 17.26 | 8 / 328 | 26% | 0.72 | 47 / 178 |
tonsil | 0% | 0 | 0 / 0 | 27% | 0.66 | 12 / 45 |
spleen | 20% | 185.48 | 49 / 241 | 0% | 0 | 0 / 0 |
heart | 17% | 143.13 | 145 / 861 | 0% | 0 | 0 / 0 |
liver | 0% | 2.70 | 1 / 226 | 16% | 0.53 | 64 / 406 |
thymus | 0% | 4.23 | 3 / 653 | 9% | 0.48 | 54 / 605 |
eye | 0% | 0 | 0 / 0 | 4% | 0.21 | 3 / 80 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.07 | 1 / 29 |
adipose | 3% | 24.57 | 38 / 1204 | 0% | 0 | 0 / 0 |
peripheral blood | 1% | 8.97 | 6 / 929 | 0% | 0 | 0 / 0 |
muscle | 0% | 0.70 | 1 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007165 | Biological process | signal transduction |
GO_0071625 | Biological process | vocalization behavior |
GO_0001525 | Biological process | angiogenesis |
GO_0007411 | Biological process | axon guidance |
GO_0035176 | Biological process | social behavior |
GO_0007158 | Biological process | neuron cell-cell adhesion |
GO_0007612 | Biological process | learning |
GO_0030534 | Biological process | adult behavior |
GO_0042995 | Cellular component | cell projection |
GO_0005886 | Cellular component | plasma membrane |
GO_0042734 | Cellular component | presynaptic membrane |
GO_0004888 | Molecular function | transmembrane signaling receptor activity |
GO_0050839 | Molecular function | cell adhesion molecule binding |
GO_0038023 | Molecular function | signaling receptor activity |
GO_0046872 | Molecular function | metal ion binding |
GO_0097109 | Molecular function | neuroligin family protein binding |
Gene name | NRXN3 |
Protein name | Neurexin-3-beta (Neurexin III-beta) [Cleaved into: Neurexin-3-beta, soluble form; Neurexin-3-beta, C-terminal fragment (NRXN3-CTF)] Neurexin-3 (Neurexin III-alpha) (Neurexin-3-alpha) Neurexin 3 |
Synonyms | C14orf60 KIAA0743 |
Description | FUNCTION: Neuronal cell surface protein that may be involved in cell recognition and cell adhesion. May mediate intracellular signaling (By similarity). . FUNCTION: Neuronal cell surface protein that may be involved in cell recognition and cell adhesion. May mediate intracellular signaling (By similarity). . FUNCTION: Neuronal cell surface protein that may be involved in cell recognition and cell adhesion. May mediate intracellular signaling. . FUNCTION: Neuronal cell surface protein that may be involved in cell recognition and cell adhesion. May mediate intracellular signaling. . FUNCTION: Neuronal cell surface protein that may be involved in cell recognition and cell adhesion. May mediate intracellular signaling. . FUNCTION: Neuronal cell surface protein that may be involved in cell recognition and cell adhesion. May mediate intracellular signaling. . FUNCTION: Neuronal cell surface protein that may be involved in cell recognition and cell adhesion. May mediate intracellular signaling. . FUNCTION: Neuronal cell surface protein that may be involved in cell recognition and cell adhesion. May mediate intracellular signaling. . FUNCTION: Neuronal cell surface protein that may be involved in cell recognition and cell adhesion. May mediate intracellular signaling. . FUNCTION: Neuronal cell surface protein that may be involved in cell recognition and cell adhesion. May mediate intracellular signaling. . |
Accessions | ENST00000676811.1 ENST00000281127.11 [Q9HDB5-2] Q9Y4C0 ENST00000554738.5 [Q9Y4C0-4] A0A7I2YQT0 ENST00000557081.1 ENST00000428277.6 [Q9HDB5-4] G3V247 A0A0U1RQC5 Q9HDB5 ENST00000557594.5 [Q9HDB5-1] ENST00000335750.7 H0YJL2 ENST00000679122.1 ENST00000553631.1 G3V4R9 ENST00000554719.5 [Q9Y4C0-3] A0A0C4DGK4 ENST00000553363.6 ENST00000555387.1 ENST00000634499.2 A0A7I2V2B1 A0A0A0MR89 A0A0U1RRJ0 ENST00000635466.2 |