Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| endothelial cell | 9 studies | 29% ± 10% | |
| oligodendrocyte | 6 studies | 33% ± 14% | |
| microglial cell | 5 studies | 21% ± 7% | |
| astrocyte | 5 studies | 34% ± 17% | |
| epithelial cell | 4 studies | 21% ± 2% | |
| ciliated cell | 3 studies | 21% ± 5% | |
| oligodendrocyte precursor cell | 3 studies | 39% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 2060.47 | 1440 / 1445 | 97% | 2.81 | 178 / 183 |
| thymus | 100% | 3797.04 | 652 / 653 | 97% | 3.81 | 586 / 605 |
| uterus | 100% | 4485.85 | 170 / 170 | 96% | 2.94 | 442 / 459 |
| prostate | 100% | 2763.25 | 245 / 245 | 94% | 2.57 | 473 / 502 |
| ovary | 100% | 5663.34 | 180 / 180 | 92% | 2.13 | 394 / 430 |
| pancreas | 99% | 1554.02 | 326 / 328 | 92% | 2.38 | 164 / 178 |
| lung | 100% | 2285.73 | 576 / 578 | 91% | 2.53 | 1046 / 1155 |
| breast | 100% | 3332.79 | 459 / 459 | 89% | 2.06 | 992 / 1118 |
| adrenal gland | 100% | 2216.49 | 258 / 258 | 88% | 1.94 | 202 / 230 |
| bladder | 100% | 2483.57 | 21 / 21 | 85% | 2.08 | 430 / 504 |
| kidney | 99% | 1693.04 | 88 / 89 | 86% | 2.59 | 775 / 901 |
| skin | 100% | 2425.71 | 1808 / 1809 | 84% | 2.38 | 397 / 472 |
| brain | 90% | 983.06 | 2365 / 2642 | 94% | 2.54 | 661 / 705 |
| stomach | 100% | 1720.72 | 358 / 359 | 70% | 1.32 | 199 / 286 |
| intestine | 100% | 2520.96 | 966 / 966 | 68% | 1.26 | 356 / 527 |
| liver | 96% | 844.94 | 216 / 226 | 50% | 0.86 | 202 / 406 |
| blood vessel | 100% | 3058.42 | 1335 / 1335 | 0% | 0 | 0 / 0 |
| spleen | 100% | 2283.72 | 241 / 241 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 100% | 1.72 | 1 / 1 |
| adipose | 100% | 3005.86 | 1203 / 1204 | 0% | 0 | 0 / 0 |
| muscle | 97% | 911.19 | 776 / 803 | 0% | 0 | 0 / 0 |
| heart | 96% | 1205.17 | 823 / 861 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 80% | 1.75 | 36 / 45 |
| lymph node | 0% | 0 | 0 / 0 | 76% | 1.33 | 22 / 29 |
| eye | 0% | 0 | 0 / 0 | 45% | 1.10 | 36 / 80 |
| peripheral blood | 34% | 326.76 | 319 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0060026 | Biological process | convergent extension |
| GO_1905515 | Biological process | non-motile cilium assembly |
| GO_0060271 | Biological process | cilium assembly |
| GO_0071910 | Biological process | determination of liver left/right asymmetry |
| GO_0048496 | Biological process | maintenance of animal organ identity |
| GO_0030324 | Biological process | lung development |
| GO_0060027 | Biological process | convergent extension involved in gastrulation |
| GO_0007368 | Biological process | determination of left/right symmetry |
| GO_0001947 | Biological process | heart looping |
| GO_0060287 | Biological process | epithelial cilium movement involved in determination of left/right asymmetry |
| GO_0071908 | Biological process | determination of intestine left/right asymmetry |
| GO_0045494 | Biological process | photoreceptor cell maintenance |
| GO_0007163 | Biological process | establishment or maintenance of cell polarity |
| GO_0035469 | Biological process | determination of pancreatic left/right asymmetry |
| GO_0030198 | Biological process | extracellular matrix organization |
| GO_0001822 | Biological process | kidney development |
| GO_0090090 | Biological process | negative regulation of canonical Wnt signaling pathway |
| GO_0003283 | Biological process | atrial septum development |
| GO_0072189 | Biological process | ureter development |
| GO_2000095 | Biological process | regulation of Wnt signaling pathway, planar cell polarity pathway |
| GO_0071909 | Biological process | determination of stomach left/right asymmetry |
| GO_0060993 | Biological process | kidney morphogenesis |
| GO_0016055 | Biological process | Wnt signaling pathway |
| GO_0006629 | Biological process | lipid metabolic process |
| GO_0005576 | Cellular component | extracellular region |
| GO_0097543 | Cellular component | ciliary inversin compartment |
| GO_0005929 | Cellular component | cilium |
| GO_0005829 | Cellular component | cytosol |
| GO_0097546 | Cellular component | ciliary base |
| GO_0005515 | Molecular function | protein binding |
| Gene name | NPHP3 |
| Protein name | Alternative protein NPHP3 Nephrocystin 3 Nephrocystin-3 Kinesin light chain |
| Synonyms | KIAA2000 |
| Description | FUNCTION: Required for normal ciliary development and function. Inhibits disheveled-1-induced canonical Wnt-signaling activity and may also play a role in the control of non-canonical Wnt signaling which regulates planar cell polarity. Probably acts as a molecular switch between different Wnt signaling pathways. Required for proper convergent extension cell movements. . FUNCTION: Kinesin is a microtubule-associated force-producing protein that play a role in organelle transport. . |
| Accessions | Q7Z494 ENST00000383282.3 [Q7Z494-7] ENST00000512094.5 H0YAM4 Q7Z491 A0A0C4DG93 ENST00000684294.1 F2Z3A8 L8E9N9 ENST00000683570.1 [Q7Z494-4] ENST00000465756.5 ENST00000469232.5 ENST00000337331.10 [Q7Z494-1] |
