NIBAN1 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
smooth muscle cell	22 studies	34% ± 14%	Explore
T cell	17 studies	27% ± 9%	Explore
CD8-positive, alpha-beta T cell	17 studies	25% ± 9%	Explore
regulatory T cell	14 studies	35% ± 12%	Explore
dendritic cell	12 studies	34% ± 11%	Explore
CD4-positive, alpha-beta T cell	11 studies	32% ± 14%	Explore
conventional dendritic cell	11 studies	22% ± 6%	Explore
natural killer cell	10 studies	21% ± 4%	Explore
pericyte	10 studies	30% ± 15%	Explore
gamma-delta T cell	10 studies	23% ± 10%	Explore
neutrophil	9 studies	31% ± 9%	Explore
monocyte	8 studies	25% ± 8%	Explore
mature NK T cell	8 studies	23% ± 6%	Explore
macrophage	7 studies	22% ± 6%	Explore
CD8-positive, alpha-beta memory T cell	7 studies	27% ± 13%	Explore
leukocyte	7 studies	29% ± 16%	Explore
mucosal invariant T cell	7 studies	26% ± 11%	Explore
microglial cell	7 studies	31% ± 8%	Explore
effector memory CD8-positive, alpha-beta T cell	7 studies	36% ± 14%	Explore
club cell	6 studies	34% ± 16%	Explore
respiratory goblet cell	6 studies	34% ± 13%	Explore
effector CD8-positive, alpha-beta T cell	6 studies	20% ± 4%	Explore
cardiac muscle cell	6 studies	59% ± 20%	Explore
CD16-negative, CD56-bright natural killer cell, human	5 studies	26% ± 8%	Explore
myeloid cell	5 studies	23% ± 3%	Explore
fibroblast	5 studies	26% ± 8%	Explore
endothelial cell	5 studies	19% ± 3%	Explore
endothelial cell of lymphatic vessel	4 studies	23% ± 6%	Explore
basal cell	4 studies	28% ± 9%	Explore
classical monocyte	4 studies	31% ± 9%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	4 studies	32% ± 4%	Explore
mucus secreting cell	4 studies	37% ± 12%	Explore
CD4-positive helper T cell	4 studies	35% ± 15%	Explore
effector memory CD4-positive, alpha-beta T cell	4 studies	26% ± 9%	Explore
innate lymphoid cell	4 studies	36% ± 11%	Explore
plasma cell	3 studies	22% ± 6%	Explore
effector CD4-positive, alpha-beta T cell	3 studies	24% ± 3%	Explore
muscle cell	3 studies	42% ± 19%	Explore
alveolar macrophage	3 studies	28% ± 4%	Explore
CD16-positive, CD56-dim natural killer cell, human	3 studies	19% ± 3%	Explore
Schwann cell	3 studies	40% ± 10%	Explore
lymphocyte	3 studies	51% ± 19%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	3 studies	27% ± 13%	Explore
myoepithelial cell	3 studies	45% ± 13%	Explore
CD4-positive, alpha-beta memory T cell	3 studies	19% ± 3%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
lung	5 studies	18% ± 4%	Explore
heart	5 studies	33% ± 11%	Explore
peripheral blood	3 studies	25% ± 3%	Explore
adipose	3 studies	16% ± 0%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
prostate	89%	11317.23	219 / 245	99%	98.69	499 / 502
esophagus	92%	26040.06	1336 / 1445	89%	31.98	163 / 183
pancreas	97%	6483.70	319 / 328	83%	17.36	148 / 178
lung	82%	4424.44	475 / 578	91%	32.86	1054 / 1155
breast	78%	5713.64	356 / 459	92%	51.60	1032 / 1118
uterus	77%	6871.08	131 / 170	81%	33.20	372 / 459
bladder	90%	35791.86	19 / 21	58%	15.18	291 / 504
stomach	66%	18647.93	238 / 359	51%	19.74	146 / 286
intestine	80%	21040.95	771 / 966	36%	7.30	190 / 527
skin	37%	2036.95	676 / 1809	72%	31.24	338 / 472
blood vessel	100%	29089.57	1334 / 1335	0%	0	0 / 0
tonsil	0%	0	0 / 0	96%	45.62	43 / 45
heart	93%	21083.31	800 / 861	0%	0	0 / 0
thymus	12%	596.22	78 / 653	75%	18.89	455 / 605
peripheral blood	85%	19672.61	791 / 929	0%	0	0 / 0
kidney	2%	95.45	2 / 89	81%	19.90	727 / 901
lymph node	0%	0	0 / 0	83%	31.87	24 / 29
adrenal gland	21%	933.52	54 / 258	56%	10.07	128 / 230
eye	0%	0	0 / 0	75%	29.98	60 / 80
muscle	75%	6691.57	601 / 803	0%	0	0 / 0
spleen	63%	3445.96	151 / 241	0%	0	0 / 0
adipose	60%	3692.69	718 / 1204	0%	0	0 / 0
ovary	12%	1022.69	22 / 180	36%	6.13	153 / 430
brain	0%	18.15	10 / 2642	42%	9.63	294 / 705
liver	0%	14.86	1 / 226	13%	2.21	52 / 406
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1