Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 46 studies | 67% ± 27% | |
pericyte | 39 studies | 57% ± 27% | |
endothelial cell | 34 studies | 51% ± 21% | |
smooth muscle cell | 29 studies | 65% ± 25% | |
endothelial cell of lymphatic vessel | 18 studies | 43% ± 16% | |
connective tissue cell | 16 studies | 58% ± 24% | |
endothelial cell of artery | 14 studies | 56% ± 23% | |
capillary endothelial cell | 13 studies | 37% ± 15% | |
myofibroblast cell | 13 studies | 72% ± 28% | |
vein endothelial cell | 13 studies | 52% ± 23% | |
endothelial cell of vascular tree | 12 studies | 62% ± 13% | |
mesothelial cell | 10 studies | 71% ± 18% | |
T cell | 6 studies | 40% ± 13% | |
adipocyte | 6 studies | 30% ± 8% | |
adventitial cell | 5 studies | 80% ± 25% | |
myeloid cell | 5 studies | 34% ± 14% | |
basal cell | 5 studies | 49% ± 32% | |
club cell | 5 studies | 30% ± 14% | |
glomerular endothelial cell | 4 studies | 94% ± 1% | |
macrophage | 4 studies | 36% ± 9% | |
chondrocyte | 4 studies | 56% ± 27% | |
epithelial cell | 4 studies | 31% ± 12% | |
luminal hormone-sensing cell of mammary gland | 4 studies | 96% ± 4% | |
mast cell | 4 studies | 27% ± 9% | |
secretory cell | 4 studies | 50% ± 9% | |
B cell | 3 studies | 24% ± 5% | |
natural killer cell | 3 studies | 37% ± 14% | |
abnormal cell | 3 studies | 52% ± 23% | |
monocyte | 3 studies | 41% ± 26% | |
ciliated cell | 3 studies | 17% ± 2% | |
lymphocyte | 3 studies | 37% ± 17% | |
myoepithelial cell | 3 studies | 72% ± 17% | |
muscle cell | 3 studies | 41% ± 13% | |
Schwann cell | 3 studies | 30% ± 10% | |
progenitor cell of mammary luminal epithelium | 3 studies | 79% ± 23% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 95% | 51249.39 | 233 / 245 | 97% | 323.70 | 489 / 502 |
breast | 96% | 81400.95 | 441 / 459 | 95% | 1713.86 | 1058 / 1118 |
thymus | 99% | 40809.96 | 647 / 653 | 79% | 161.25 | 475 / 605 |
adrenal gland | 98% | 37055.85 | 254 / 258 | 67% | 145.13 | 155 / 230 |
lung | 97% | 31609.15 | 558 / 578 | 57% | 115.18 | 658 / 1155 |
kidney | 89% | 30058.90 | 79 / 89 | 63% | 165.22 | 568 / 901 |
uterus | 97% | 58991.46 | 165 / 170 | 50% | 137.08 | 228 / 459 |
bladder | 86% | 24660.52 | 18 / 21 | 37% | 94.86 | 187 / 504 |
intestine | 78% | 31944.02 | 753 / 966 | 24% | 55.10 | 127 / 527 |
ovary | 73% | 19371.94 | 132 / 180 | 28% | 48.35 | 121 / 430 |
ureter | 0% | 0 | 0 / 0 | 100% | 87.61 | 1 / 1 |
blood vessel | 100% | 216292.02 | 1334 / 1335 | 0% | 0 | 0 / 0 |
adipose | 94% | 31117.44 | 1136 / 1204 | 0% | 0 | 0 / 0 |
pancreas | 4% | 522.36 | 14 / 328 | 86% | 307.86 | 153 / 178 |
esophagus | 66% | 19730.85 | 952 / 1445 | 23% | 42.35 | 43 / 183 |
heart | 80% | 31456.46 | 690 / 861 | 0% | 0 | 0 / 0 |
stomach | 42% | 19943.80 | 149 / 359 | 38% | 115.88 | 108 / 286 |
skin | 31% | 4157.19 | 556 / 1809 | 47% | 300.93 | 224 / 472 |
brain | 0% | 26.31 | 5 / 2642 | 21% | 40.65 | 150 / 705 |
eye | 0% | 0 | 0 / 0 | 21% | 26.12 | 17 / 80 |
liver | 0% | 0 | 0 / 226 | 18% | 23.78 | 72 / 406 |
spleen | 11% | 1635.47 | 26 / 241 | 0% | 0 | 0 / 0 |
muscle | 4% | 493.18 | 31 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 2% | 1.45 | 1 / 45 |
peripheral blood | 0% | 67.58 | 4 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0001503 | Biological process | ossification |
GO_0030500 | Biological process | regulation of bone mineralization |
GO_0001502 | Biological process | cartilage condensation |
GO_0030154 | Biological process | cell differentiation |
GO_0070062 | Cellular component | extracellular exosome |
GO_0062023 | Cellular component | collagen-containing extracellular matrix |
GO_0031012 | Cellular component | extracellular matrix |
GO_0005201 | Molecular function | extracellular matrix structural constituent |
GO_0008147 | Molecular function | structural constituent of bone |
GO_0005509 | Molecular function | calcium ion binding |
GO_0005515 | Molecular function | protein binding |
Gene name | MGP |
Protein name | Matrix Gla protein (MGP) (Cell growth-inhibiting gene 36 protein) Matrix Gla protein |
Synonyms | GIG36 MGLAP |
Description | FUNCTION: Associates with the organic matrix of bone and cartilage. Thought to act as an inhibitor of bone formation. |
Accessions | P08493 ENST00000228938.5 [P08493-2] ENST00000539261.6 [P08493-1] H0YGZ6 ENST00000545199.5 |