Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 18 studies | 32% ± 11% | |
astrocyte | 11 studies | 30% ± 14% | |
oligodendrocyte precursor cell | 10 studies | 31% ± 13% | |
oligodendrocyte | 10 studies | 28% ± 10% | |
glutamatergic neuron | 9 studies | 47% ± 24% | |
microglial cell | 9 studies | 29% ± 9% | |
adipocyte | 9 studies | 25% ± 5% | |
GABAergic neuron | 8 studies | 42% ± 22% | |
B cell | 7 studies | 23% ± 7% | |
macrophage | 7 studies | 29% ± 7% | |
interneuron | 6 studies | 41% ± 23% | |
fibroblast | 6 studies | 28% ± 8% | |
endothelial cell of lymphatic vessel | 6 studies | 35% ± 8% | |
natural killer cell | 5 studies | 19% ± 4% | |
cardiac muscle cell | 5 studies | 22% ± 4% | |
ciliated cell | 5 studies | 24% ± 6% | |
T cell | 5 studies | 19% ± 4% | |
pericyte | 5 studies | 25% ± 7% | |
smooth muscle cell | 5 studies | 21% ± 4% | |
neuron | 4 studies | 46% ± 19% | |
epithelial cell | 4 studies | 36% ± 13% | |
lymphocyte | 4 studies | 26% ± 9% | |
retina horizontal cell | 4 studies | 23% ± 5% | |
monocyte | 4 studies | 21% ± 3% | |
type II pneumocyte | 4 studies | 19% ± 5% | |
basal cell | 4 studies | 32% ± 14% | |
GABAergic interneuron | 3 studies | 25% ± 2% | |
plasma cell | 3 studies | 31% ± 8% | |
effector memory CD8-positive, alpha-beta T cell | 3 studies | 18% ± 1% | |
myeloid cell | 3 studies | 20% ± 5% | |
endothelial cell of vascular tree | 3 studies | 29% ± 12% | |
dendritic cell | 3 studies | 19% ± 3% | |
alveolar macrophage | 3 studies | 23% ± 7% | |
club cell | 3 studies | 24% ± 7% | |
type I pneumocyte | 3 studies | 21% ± 6% | |
granule cell | 3 studies | 24% ± 7% | |
mast cell | 3 studies | 21% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 970.94 | 1445 / 1445 | 100% | 6.95 | 183 / 183 |
pancreas | 100% | 653.39 | 328 / 328 | 100% | 5.44 | 178 / 178 |
prostate | 100% | 1100.68 | 245 / 245 | 100% | 6.41 | 502 / 502 |
thymus | 100% | 1073.26 | 653 / 653 | 100% | 7.76 | 605 / 605 |
breast | 100% | 1246.24 | 459 / 459 | 100% | 7.31 | 1117 / 1118 |
brain | 100% | 797.94 | 2639 / 2642 | 100% | 7.71 | 705 / 705 |
uterus | 100% | 1147.89 | 170 / 170 | 100% | 6.27 | 458 / 459 |
lung | 100% | 941.00 | 577 / 578 | 100% | 6.02 | 1154 / 1155 |
stomach | 100% | 832.19 | 359 / 359 | 100% | 5.88 | 285 / 286 |
bladder | 100% | 1104.95 | 21 / 21 | 100% | 5.33 | 502 / 504 |
kidney | 100% | 779.90 | 89 / 89 | 99% | 5.30 | 894 / 901 |
intestine | 100% | 1032.41 | 966 / 966 | 99% | 5.41 | 522 / 527 |
ovary | 100% | 1002.57 | 180 / 180 | 99% | 4.30 | 424 / 430 |
skin | 100% | 1127.91 | 1809 / 1809 | 99% | 6.28 | 465 / 472 |
adrenal gland | 100% | 853.28 | 258 / 258 | 98% | 4.35 | 226 / 230 |
liver | 100% | 449.38 | 225 / 226 | 88% | 2.47 | 357 / 406 |
adipose | 100% | 1169.33 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1182.38 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 7.46 | 29 / 29 |
muscle | 100% | 1264.24 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1183.57 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 8.39 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 1.63 | 1 / 1 |
heart | 99% | 679.06 | 851 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 91% | 3.53 | 73 / 80 |
peripheral blood | 87% | 733.74 | 806 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0021987 | Biological process | cerebral cortex development |
GO_0071539 | Biological process | protein localization to centrosome |
GO_0000132 | Biological process | establishment of mitotic spindle orientation |
GO_0060348 | Biological process | bone development |
GO_0097150 | Biological process | neuronal stem cell population maintenance |
GO_0000278 | Biological process | mitotic cell cycle |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0050727 | Biological process | regulation of inflammatory response |
GO_0060623 | Biological process | regulation of chromosome condensation |
GO_0046605 | Biological process | regulation of centrosome cycle |
GO_0005813 | Cellular component | centrosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005737 | Cellular component | cytoplasm |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
Gene name | MCPH1 |
Protein name | Truncated microcephalin Microcephalin 1 Microcephalin |
Synonyms | |
Description | FUNCTION: Implicated in chromosome condensation and DNA damage induced cellular responses. May play a role in neurogenesis and regulation of the size of the cerebral cortex. . FUNCTION: Implicated in chromosome condensation and DNA damage induced cellular responses. May play a role in neurogenesis and regulation of the size of the cerebral cortex. . FUNCTION: Implicated in chromosome condensation and DNA damage induced cellular responses. May play a role in neurogenesis and regulation of the size of the cerebral cortex. . FUNCTION: Implicated in chromosome condensation and DNA damage induced cellular responses. May play a role in neurogenesis and regulation of the size of the cerebral cortex. . FUNCTION: Implicated in chromosome condensation and DNA damage induced cellular responses. May play a role in neurogenesis and regulation of the size of the cerebral cortex. . FUNCTION: Implicated in chromosome condensation and DNA damage induced cellular responses. May play a role in neurogenesis and regulation of the size of the cerebral cortex. . FUNCTION: Implicated in chromosome condensation and DNA damage induced cellular responses. May play a role in neurogenesis and regulation of the size of the cerebral cortex. . FUNCTION: Implicated in chromosome condensation and DNA damage induced cellular responses. May play a role in neurogenesis and regulation of the size of the cerebral cortex. . FUNCTION: Implicated in chromosome condensation and DNA damage induced cellular responses. May play a role in neurogenesis and regulation of the size of the cerebral cortex. . FUNCTION: Implicated in chromosome condensation and DNA damage induced cellular responses. May play a role in neurogenesis and regulation of the size of the cerebral cortex. . FUNCTION: Implicated in chromosome condensation and DNA damage induced cellular responses. May play a role in neurogenesis and regulation of the size of the cerebral cortex. . |
Accessions | Q6RAY6 Q6RB59 ENST00000690682.1 Q6RBC6 Q6W791 Q6RAI2 Q6W7E0 Q6RB60 Q6RBG9 ENST00000690159.1 ENST00000690518.1 A0A8I5KRI7 A0A8I5KWR1 A0A8I5KX36 ENST00000686750.1 Q6RA82 A0A8I5QKY7 A0A8I5KW78 Q6R9U9 Q6RAR7 ENST00000692836.1 ENST00000690708.1 A0A8I5QJK3 ENST00000688388.1 Q6RAS8 ENST00000689348.1 A0A8I5KPV6 ENST00000693231.1 ENST00000690826.1 Q8NEM0 ENST00000687413.1 ENST00000687720.1 A0A8I5KYD2 A0A8I5KTK9 A0A1B2M4G2 Q6RB57 A0A172QZW0 Q6R9V4 Q6RBX4 Q6RA50 ENST00000691435.1 ENST00000692938.1 Q6W7E4 ENST00000688452.1 A0A8I5KQQ3 Q6W788 H8ZSC4 ENST00000344683.10 [Q8NEM0-1] A0A8I5KQZ4 ENST00000519480.6 [Q8NEM0-3] A0A8I5QKX9 Q6RAS2 A0A8I5KRS3 A0A8I5KYX6 ENST00000522905.1 [Q8NEM0-2] Q6RAS1 Q6W796 Q6RAS3 ENST00000689736.1 Q6RBJ2 A0A8I5KXJ5 Q6R9U8 Q6W795 Q6RBQ8 ENST00000689633.1 Q6RAS0 A0A8I5KR97 A0A8I5KV10 ENST00000692534.1 A0A8I5KSF2 Q6RAS6 Q6RAP8 Q6W799 ENST00000691655.1 Q6RAB6 A0A8I5KXP9 ENST00000685179.1 A0A8I5KR64 ENST00000688099.1 Q6RAQ8 Q6W7E5 A0A8I5KZ89 ENST00000688101.1 ENST00000521129.2 Q6RAB1 Q6RAZ4 |