Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 20 studies | 73% ± 19% | |
fibroblast | 17 studies | 39% ± 19% | |
ciliated cell | 16 studies | 45% ± 23% | |
oligodendrocyte | 15 studies | 42% ± 18% | |
oligodendrocyte precursor cell | 15 studies | 65% ± 18% | |
glutamatergic neuron | 12 studies | 79% ± 20% | |
GABAergic neuron | 11 studies | 75% ± 21% | |
microglial cell | 11 studies | 37% ± 22% | |
pericyte | 10 studies | 35% ± 24% | |
adipocyte | 10 studies | 62% ± 21% | |
endothelial cell | 9 studies | 51% ± 20% | |
neuron | 8 studies | 67% ± 11% | |
retinal ganglion cell | 7 studies | 57% ± 22% | |
amacrine cell | 7 studies | 57% ± 17% | |
smooth muscle cell | 7 studies | 40% ± 24% | |
interneuron | 6 studies | 84% ± 11% | |
retina horizontal cell | 6 studies | 41% ± 18% | |
epithelial cell | 5 studies | 56% ± 24% | |
club cell | 5 studies | 42% ± 14% | |
mesothelial cell | 5 studies | 45% ± 20% | |
Mueller cell | 5 studies | 43% ± 21% | |
type I pneumocyte | 5 studies | 23% ± 5% | |
type II pneumocyte | 5 studies | 58% ± 6% | |
granule cell | 4 studies | 64% ± 15% | |
retinal rod cell | 4 studies | 27% ± 11% | |
respiratory goblet cell | 4 studies | 30% ± 13% | |
myofibroblast cell | 4 studies | 27% ± 8% | |
basal cell | 4 studies | 38% ± 19% | |
differentiation-committed oligodendrocyte precursor | 3 studies | 57% ± 4% | |
GABAergic interneuron | 3 studies | 82% ± 5% | |
glial cell | 3 studies | 48% ± 29% | |
macrophage | 3 studies | 35% ± 20% | |
progenitor cell | 3 studies | 50% ± 21% | |
retinal bipolar neuron | 3 studies | 20% ± 1% | |
GABAergic amacrine cell | 3 studies | 73% ± 6% | |
OFF-bipolar cell | 3 studies | 38% ± 4% | |
ON-bipolar cell | 3 studies | 32% ± 7% | |
glycinergic amacrine cell | 3 studies | 65% ± 5% | |
retinal pigment epithelial cell | 3 studies | 65% ± 18% | |
neural progenitor cell | 3 studies | 57% ± 21% | |
connective tissue cell | 3 studies | 31% ± 11% | |
ependymal cell | 3 studies | 89% ± 5% | |
renal principal cell | 3 studies | 61% ± 32% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 8645.51 | 2642 / 2642 | 99% | 9.20 | 699 / 705 |
prostate | 99% | 3883.57 | 242 / 245 | 95% | 3.83 | 478 / 502 |
adrenal gland | 98% | 1939.48 | 252 / 258 | 80% | 2.35 | 183 / 230 |
thymus | 99% | 1883.71 | 646 / 653 | 71% | 1.65 | 431 / 605 |
kidney | 99% | 2190.72 | 88 / 89 | 70% | 1.40 | 630 / 901 |
bladder | 86% | 1993.19 | 18 / 21 | 49% | 1.32 | 246 / 504 |
uterus | 100% | 3660.84 | 170 / 170 | 32% | 0.89 | 145 / 459 |
ovary | 98% | 1746.41 | 177 / 180 | 8% | 0.14 | 36 / 430 |
lung | 68% | 763.81 | 393 / 578 | 31% | 0.68 | 357 / 1155 |
breast | 66% | 930.78 | 304 / 459 | 23% | 0.43 | 257 / 1118 |
adipose | 85% | 1480.70 | 1022 / 1204 | 0% | 0 | 0 / 0 |
intestine | 63% | 740.34 | 613 / 966 | 3% | 0.06 | 17 / 527 |
esophagus | 39% | 464.95 | 562 / 1445 | 26% | 0.63 | 47 / 183 |
spleen | 61% | 607.74 | 147 / 241 | 0% | 0 | 0 / 0 |
stomach | 44% | 882.51 | 157 / 359 | 9% | 0.20 | 27 / 286 |
pancreas | 10% | 83.76 | 33 / 328 | 35% | 0.95 | 63 / 178 |
blood vessel | 44% | 529.48 | 586 / 1335 | 0% | 0 | 0 / 0 |
heart | 30% | 318.15 | 257 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 16% | 0.33 | 7 / 45 |
lymph node | 0% | 0 | 0 / 0 | 14% | 0.49 | 4 / 29 |
skin | 1% | 5.94 | 13 / 1809 | 6% | 0.09 | 26 / 472 |
liver | 1% | 6.08 | 2 / 226 | 4% | 0.08 | 18 / 406 |
eye | 0% | 0 | 0 / 0 | 1% | 0.02 | 1 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007254 | Biological process | JNK cascade |
GO_0007165 | Biological process | signal transduction |
GO_0038095 | Biological process | Fc-epsilon receptor signaling pathway |
GO_0042752 | Biological process | regulation of circadian rhythm |
GO_0009416 | Biological process | response to light stimulus |
GO_0090398 | Biological process | cellular senescence |
GO_0006468 | Biological process | protein phosphorylation |
GO_0048511 | Biological process | rhythmic process |
GO_0005886 | Cellular component | plasma membrane |
GO_0005739 | Cellular component | mitochondrion |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0106310 | Molecular function | protein serine kinase activity |
GO_0004708 | Molecular function | MAP kinase kinase activity |
GO_0004705 | Molecular function | JUN kinase activity |
GO_0005524 | Molecular function | ATP binding |
GO_0005515 | Molecular function | protein binding |
Gene name | MAPK10 |
Protein name | Mitogen-activated protein kinase 10 (MAP kinase 10) (MAPK 10) (EC 2.7.11.24) (MAP kinase p49 3F12) (Stress-activated protein kinase 1b) (SAPK1b) (Stress-activated protein kinase JNK3) (c-Jun N-terminal kinase 3) Mitogen-activated protein kinase 10 Stress-activated protein kinase JNK (EC 2.7.11.24) |
Synonyms | JNK3A JNK3 PRKM10 SAPK1B |
Description | FUNCTION: Serine/threonine-protein kinase involved in various processes such as neuronal proliferation, differentiation, migration and programmed cell death. Extracellular stimuli such as pro-inflammatory cytokines or physical stress stimulate the stress-activated protein kinase/c-Jun N-terminal kinase (SAP/JNK) signaling pathway. In this cascade, two dual specificity kinases MAP2K4/MKK4 and MAP2K7/MKK7 phosphorylate and activate MAPK10/JNK3. In turn, MAPK10/JNK3 phosphorylates a number of transcription factors, primarily components of AP-1 such as JUN and ATF2 and thus regulates AP-1 transcriptional activity. Plays regulatory roles in the signaling pathways during neuronal apoptosis. Phosphorylates the neuronal microtubule regulator STMN2. Acts in the regulation of the amyloid-beta precursor protein/APP signaling during neuronal differentiation by phosphorylating APP. Participates also in neurite growth in spiral ganglion neurons. Phosphorylates the CLOCK-BMAL1 heterodimer and plays a role in the photic regulation of the circadian clock . Phosphorylates JUND and this phosphorylation is inhibited in the presence of MEN1 . . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . FUNCTION: Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulates transcriptional activity. . |
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