Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| endothelial cell | 20 studies | 33% ± 13% | |
| astrocyte | 14 studies | 36% ± 15% | |
| oligodendrocyte | 13 studies | 41% ± 15% | |
| oligodendrocyte precursor cell | 12 studies | 43% ± 18% | |
| fibroblast | 12 studies | 32% ± 13% | |
| glutamatergic neuron | 11 studies | 40% ± 23% | |
| microglial cell | 11 studies | 30% ± 10% | |
| macrophage | 10 studies | 31% ± 13% | |
| pericyte | 10 studies | 30% ± 14% | |
| GABAergic neuron | 9 studies | 43% ± 21% | |
| adipocyte | 9 studies | 26% ± 7% | |
| smooth muscle cell | 8 studies | 25% ± 7% | |
| epithelial cell | 7 studies | 28% ± 10% | |
| neuron | 6 studies | 38% ± 20% | |
| interneuron | 6 studies | 44% ± 22% | |
| B cell | 6 studies | 24% ± 5% | |
| dendritic cell | 6 studies | 20% ± 2% | |
| T cell | 6 studies | 22% ± 4% | |
| endothelial cell of lymphatic vessel | 6 studies | 33% ± 8% | |
| myeloid cell | 5 studies | 22% ± 5% | |
| cardiac muscle cell | 5 studies | 30% ± 7% | |
| mast cell | 5 studies | 21% ± 6% | |
| monocyte | 5 studies | 24% ± 6% | |
| type I pneumocyte | 5 studies | 23% ± 6% | |
| type II pneumocyte | 5 studies | 21% ± 6% | |
| granule cell | 4 studies | 27% ± 5% | |
| ciliated cell | 4 studies | 25% ± 9% | |
| amacrine cell | 4 studies | 27% ± 7% | |
| retina horizontal cell | 4 studies | 22% ± 5% | |
| retinal rod cell | 4 studies | 22% ± 2% | |
| club cell | 4 studies | 23% ± 9% | |
| natural killer cell | 4 studies | 23% ± 4% | |
| GABAergic interneuron | 3 studies | 30% ± 5% | |
| glial cell | 3 studies | 33% ± 6% | |
| plasma cell | 3 studies | 25% ± 6% | |
| CD4-positive, alpha-beta T cell | 3 studies | 19% ± 3% | |
| CD8-positive, alpha-beta T cell | 3 studies | 20% ± 4% | |
| mesothelial cell | 3 studies | 28% ± 7% | |
| GABAergic amacrine cell | 3 studies | 25% ± 7% | |
| Mueller cell | 3 studies | 24% ± 5% | |
| glycinergic amacrine cell | 3 studies | 27% ± 3% | |
| retinal cone cell | 3 studies | 21% ± 6% | |
| endothelial cell of vascular tree | 3 studies | 29% ± 14% | |
| hepatocyte | 3 studies | 36% ± 18% | |
| ependymal cell | 3 studies | 35% ± 15% | |
| alveolar macrophage | 3 studies | 28% ± 8% | |
| Schwann cell | 3 studies | 38% ± 19% | |
| lymphocyte | 3 studies | 37% ± 11% | |
| basal cell | 3 studies | 31% ± 14% | |
| goblet cell | 3 studies | 33% ± 20% | |
| mural cell | 3 studies | 32% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| breast | 100% | 2871.96 | 459 / 459 | 100% | 10.44 | 1118 / 1118 |
| esophagus | 100% | 3235.89 | 1445 / 1445 | 100% | 13.10 | 183 / 183 |
| intestine | 100% | 3412.03 | 966 / 966 | 100% | 7.60 | 527 / 527 |
| prostate | 100% | 3669.94 | 245 / 245 | 100% | 11.46 | 502 / 502 |
| bladder | 100% | 3587.38 | 21 / 21 | 100% | 8.81 | 503 / 504 |
| uterus | 100% | 4066.79 | 170 / 170 | 100% | 11.46 | 458 / 459 |
| skin | 100% | 2714.67 | 1808 / 1809 | 100% | 13.45 | 471 / 472 |
| lung | 100% | 2700.43 | 577 / 578 | 100% | 10.82 | 1153 / 1155 |
| brain | 100% | 2542.20 | 2632 / 2642 | 100% | 13.36 | 705 / 705 |
| ovary | 100% | 4185.77 | 180 / 180 | 100% | 9.30 | 428 / 430 |
| thymus | 100% | 2474.23 | 652 / 653 | 100% | 7.99 | 602 / 605 |
| stomach | 100% | 2186.88 | 359 / 359 | 99% | 8.52 | 284 / 286 |
| kidney | 100% | 1828.30 | 89 / 89 | 98% | 8.04 | 887 / 901 |
| pancreas | 98% | 1245.05 | 322 / 328 | 99% | 9.46 | 176 / 178 |
| adrenal gland | 100% | 2310.58 | 258 / 258 | 97% | 5.94 | 222 / 230 |
| liver | 100% | 1312.86 | 226 / 226 | 93% | 4.87 | 377 / 406 |
| adipose | 100% | 2912.30 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 3660.60 | 1335 / 1335 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 100% | 7.88 | 80 / 80 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 16.24 | 29 / 29 |
| muscle | 100% | 2464.22 | 803 / 803 | 0% | 0 | 0 / 0 |
| spleen | 100% | 3425.76 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 12.47 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 3.25 | 1 / 1 |
| heart | 99% | 2203.38 | 855 / 861 | 0% | 0 | 0 / 0 |
| peripheral blood | 91% | 1904.75 | 844 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0032185 | Biological process | septin cytoskeleton organization |
| GO_0005829 | Cellular component | cytosol |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0005515 | Molecular function | protein binding |
| Gene name | LRCH3 |
| Protein name | DISP complex protein LRCH3 (Leucine-rich repeat and calponin homology domain-containing protein 3) Leucine rich repeats and calponin homology domain containing 3 |
| Synonyms | |
| Description | FUNCTION: As part of the DISP complex, may regulate the association of septins with actin and thereby regulate the actin cytoskeleton. . |
| Accessions | ENST00000443727.1 ENST00000334859.8 [Q96II8-3] E9PD99 F8WFB5 H7C0J8 ENST00000425562.7 [Q96II8-1] ENST00000452660.5 ENST00000428136.2 [Q96II8-2] Q96II8 ENST00000414675.6 [Q96II8-4] ENST00000438796.6 [Q96II8-2] ENST00000441090.6 ENST00000433298.5 H7C1G3 |