Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 25 studies | 36% ± 16% | |
astrocyte | 21 studies | 65% ± 21% | |
macrophage | 18 studies | 32% ± 16% | |
oligodendrocyte | 16 studies | 66% ± 17% | |
oligodendrocyte precursor cell | 16 studies | 55% ± 20% | |
fibroblast | 14 studies | 27% ± 12% | |
glutamatergic neuron | 12 studies | 75% ± 17% | |
microglial cell | 12 studies | 34% ± 17% | |
GABAergic neuron | 11 studies | 69% ± 20% | |
pericyte | 10 studies | 32% ± 18% | |
smooth muscle cell | 10 studies | 27% ± 9% | |
neuron | 9 studies | 58% ± 17% | |
epithelial cell | 9 studies | 35% ± 14% | |
myeloid cell | 9 studies | 33% ± 11% | |
adipocyte | 9 studies | 37% ± 9% | |
type I pneumocyte | 8 studies | 29% ± 12% | |
retinal cone cell | 8 studies | 73% ± 19% | |
retinal rod cell | 8 studies | 62% ± 25% | |
amacrine cell | 7 studies | 49% ± 16% | |
retinal ganglion cell | 7 studies | 80% ± 10% | |
interneuron | 6 studies | 81% ± 10% | |
retina horizontal cell | 6 studies | 55% ± 18% | |
Mueller cell | 6 studies | 43% ± 20% | |
endothelial cell of lymphatic vessel | 6 studies | 35% ± 13% | |
monocyte | 6 studies | 29% ± 7% | |
retinal bipolar neuron | 5 studies | 59% ± 23% | |
cardiac muscle cell | 5 studies | 49% ± 13% | |
dendritic cell | 5 studies | 22% ± 3% | |
ciliated cell | 5 studies | 25% ± 6% | |
basal cell | 5 studies | 27% ± 17% | |
type II pneumocyte | 5 studies | 28% ± 6% | |
glial cell | 4 studies | 46% ± 15% | |
granule cell | 4 studies | 76% ± 6% | |
retinal pigment epithelial cell | 4 studies | 37% ± 23% | |
OFF-bipolar cell | 4 studies | 73% ± 17% | |
ON-bipolar cell | 4 studies | 75% ± 16% | |
club cell | 4 studies | 26% ± 7% | |
classical monocyte | 3 studies | 21% ± 3% | |
non-classical monocyte | 3 studies | 21% ± 6% | |
differentiation-committed oligodendrocyte precursor | 3 studies | 61% ± 12% | |
GABAergic interneuron | 3 studies | 76% ± 2% | |
progenitor cell | 3 studies | 51% ± 15% | |
squamous epithelial cell | 3 studies | 39% ± 18% | |
mesothelial cell | 3 studies | 26% ± 7% | |
vein endothelial cell | 3 studies | 34% ± 20% | |
GABAergic amacrine cell | 3 studies | 63% ± 8% | |
glycinergic amacrine cell | 3 studies | 57% ± 6% | |
rod bipolar cell | 3 studies | 69% ± 16% | |
endothelial cell of vascular tree | 3 studies | 36% ± 18% | |
hepatocyte | 3 studies | 49% ± 12% | |
abnormal cell | 3 studies | 37% ± 15% | |
ependymal cell | 3 studies | 73% ± 12% | |
adventitial cell | 3 studies | 21% ± 6% | |
myofibroblast cell | 3 studies | 35% ± 13% | |
alveolar macrophage | 3 studies | 45% ± 7% | |
capillary endothelial cell | 3 studies | 25% ± 9% | |
respiratory goblet cell | 3 studies | 29% ± 12% | |
Schwann cell | 3 studies | 38% ± 20% | |
brush cell | 3 studies | 31% ± 10% | |
mucus secreting cell | 3 studies | 29% ± 12% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 25903.33 | 2642 / 2642 | 100% | 83.83 | 703 / 705 |
esophagus | 99% | 6616.62 | 1436 / 1445 | 100% | 20.56 | 183 / 183 |
ovary | 99% | 5474.62 | 179 / 180 | 97% | 16.13 | 416 / 430 |
lung | 97% | 4921.26 | 560 / 578 | 98% | 14.10 | 1135 / 1155 |
uterus | 99% | 6082.51 | 168 / 170 | 96% | 13.19 | 440 / 459 |
skin | 99% | 5796.65 | 1785 / 1809 | 95% | 15.00 | 447 / 472 |
intestine | 97% | 5930.36 | 938 / 966 | 96% | 11.66 | 505 / 527 |
thymus | 97% | 4661.56 | 635 / 653 | 95% | 14.75 | 572 / 605 |
prostate | 92% | 4170.96 | 226 / 245 | 99% | 15.93 | 497 / 502 |
breast | 94% | 4314.99 | 430 / 459 | 97% | 15.45 | 1080 / 1118 |
adrenal gland | 99% | 6404.90 | 255 / 258 | 91% | 13.01 | 210 / 230 |
pancreas | 77% | 3102.70 | 253 / 328 | 97% | 10.49 | 172 / 178 |
kidney | 78% | 3180.28 | 69 / 89 | 96% | 13.68 | 865 / 901 |
bladder | 86% | 4711.48 | 18 / 21 | 88% | 9.73 | 441 / 504 |
stomach | 57% | 2671.19 | 203 / 359 | 96% | 12.91 | 274 / 286 |
liver | 51% | 1910.40 | 116 / 226 | 74% | 6.22 | 300 / 406 |
muscle | 100% | 34746.74 | 803 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 12.78 | 44 / 45 |
blood vessel | 97% | 5071.58 | 1292 / 1335 | 0% | 0 | 0 / 0 |
adipose | 96% | 4677.19 | 1159 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 89% | 10.27 | 71 / 80 |
heart | 87% | 5591.41 | 753 / 861 | 0% | 0 | 0 / 0 |
spleen | 71% | 2712.58 | 172 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 51% | 2595.57 | 474 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 45% | 4.19 | 13 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007270 | Biological process | neuron-neuron synaptic transmission |
GO_0007274 | Biological process | neuromuscular synaptic transmission |
GO_0048490 | Biological process | anterograde synaptic vesicle transport |
GO_0016192 | Biological process | vesicle-mediated transport |
GO_0007018 | Biological process | microtubule-based movement |
GO_0006915 | Biological process | apoptotic process |
GO_0030705 | Biological process | cytoskeleton-dependent intracellular transport |
GO_0005874 | Cellular component | microtubule |
GO_0031410 | Cellular component | cytoplasmic vesicle |
GO_0005739 | Cellular component | mitochondrion |
GO_0030672 | Cellular component | synaptic vesicle membrane |
GO_0005871 | Cellular component | kinesin complex |
GO_0043005 | Cellular component | neuron projection |
GO_0030425 | Cellular component | dendrite |
GO_0030424 | Cellular component | axon |
GO_1904115 | Cellular component | axon cytoplasm |
GO_0008574 | Molecular function | plus-end-directed microtubule motor activity |
GO_0008017 | Molecular function | microtubule binding |
GO_0005524 | Molecular function | ATP binding |
GO_0005515 | Molecular function | protein binding |
GO_0016887 | Molecular function | ATP hydrolysis activity |
GO_0019894 | Molecular function | kinesin binding |
Gene name | KIF1B |
Protein name | Kinesin-like protein KIF1B (Klp) Kinesin family member 1B Kinesin-like protein |
Synonyms | KIAA0591 KIF1Bbeta KIAA1448 |
Description | FUNCTION: Motor for anterograde transport of mitochondria. Has a microtubule plus end-directed motility. Isoform 2 is required for induction of neuronal apoptosis. .; FUNCTION: Isoform 1 mediates the transport of synaptic vesicles in neuronal cells. . |
Accessions | ENST00000696503.1 ENST00000676179.1 [O60333-1] A0A8Q3SIN8 ENST00000377093.9 [O60333-3] ENST00000696500.1 A0A8Q3SIT2 ENST00000622724.3 ENST00000377083.5 [O60333-3] ENST00000263934.10 [O60333-2] A0A8Q3WLB2 Q4R9M9 A0A087WWA3 A0A8Q3WLD7 ENST00000696502.1 A0A8Q3WMG4 A0A0U1RQL3 ENST00000696501.1 ENST00000696504.1 ENST00000377086.5 [O60333-1] ENST00000635499.1 A0A8Q3WLB3 ENST00000620295.2 A0A8Q3WL98 ENST00000696507.1 ENST00000696505.1 ENST00000377081.5 [O60333-4] ENST00000696506.1 O60333 A0A8Q3WM94 |