Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 24 studies | 39% ± 13% | |
astrocyte | 18 studies | 43% ± 17% | |
oligodendrocyte | 15 studies | 62% ± 17% | |
oligodendrocyte precursor cell | 15 studies | 74% ± 18% | |
fibroblast | 13 studies | 38% ± 11% | |
smooth muscle cell | 12 studies | 40% ± 13% | |
macrophage | 10 studies | 36% ± 14% | |
glutamatergic neuron | 9 studies | 45% ± 19% | |
pericyte | 9 studies | 34% ± 9% | |
microglial cell | 9 studies | 28% ± 14% | |
adipocyte | 9 studies | 52% ± 11% | |
epithelial cell | 8 studies | 35% ± 22% | |
GABAergic neuron | 7 studies | 36% ± 15% | |
mesothelial cell | 7 studies | 36% ± 13% | |
ciliated cell | 7 studies | 28% ± 13% | |
endothelial cell of lymphatic vessel | 7 studies | 33% ± 9% | |
type II pneumocyte | 6 studies | 41% ± 13% | |
neuron | 5 studies | 40% ± 22% | |
myeloid cell | 5 studies | 25% ± 8% | |
cardiac muscle cell | 5 studies | 60% ± 15% | |
monocyte | 5 studies | 40% ± 8% | |
basal cell | 5 studies | 45% ± 25% | |
type I pneumocyte | 5 studies | 32% ± 5% | |
retinal pigment epithelial cell | 4 studies | 54% ± 23% | |
dendritic cell | 4 studies | 21% ± 2% | |
mast cell | 4 studies | 22% ± 6% | |
vein endothelial cell | 4 studies | 30% ± 10% | |
Mueller cell | 4 studies | 64% ± 14% | |
amacrine cell | 4 studies | 39% ± 8% | |
retinal rod cell | 4 studies | 32% ± 6% | |
endothelial cell of vascular tree | 4 studies | 34% ± 11% | |
club cell | 4 studies | 30% ± 6% | |
differentiation-committed oligodendrocyte precursor | 3 studies | 57% ± 10% | |
glial cell | 3 studies | 32% ± 4% | |
retinal cone cell | 3 studies | 27% ± 7% | |
hepatocyte | 3 studies | 58% ± 21% | |
ependymal cell | 3 studies | 44% ± 18% | |
megakaryocyte-erythroid progenitor cell | 3 studies | 18% ± 1% | |
alveolar macrophage | 3 studies | 47% ± 9% | |
capillary endothelial cell | 3 studies | 40% ± 8% | |
myofibroblast cell | 3 studies | 37% ± 15% | |
goblet cell | 3 studies | 33% ± 19% | |
transit amplifying cell | 3 studies | 45% ± 36% | |
granule cell | 3 studies | 51% ± 14% | |
interneuron | 3 studies | 40% ± 17% | |
mucus secreting cell | 3 studies | 31% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 4278.25 | 244 / 245 | 100% | 25.33 | 502 / 502 |
esophagus | 100% | 4939.31 | 1445 / 1445 | 99% | 25.67 | 182 / 183 |
skin | 100% | 5199.51 | 1808 / 1809 | 99% | 37.63 | 466 / 472 |
breast | 100% | 4697.40 | 459 / 459 | 99% | 26.36 | 1102 / 1118 |
brain | 100% | 3102.41 | 2632 / 2642 | 99% | 28.53 | 697 / 705 |
intestine | 100% | 5653.00 | 966 / 966 | 98% | 16.70 | 517 / 527 |
lung | 100% | 5075.95 | 577 / 578 | 98% | 21.00 | 1135 / 1155 |
thymus | 100% | 4632.01 | 653 / 653 | 97% | 24.65 | 584 / 605 |
uterus | 100% | 5825.78 | 170 / 170 | 96% | 15.55 | 439 / 459 |
bladder | 100% | 7128.43 | 21 / 21 | 96% | 16.68 | 482 / 504 |
stomach | 97% | 2733.25 | 347 / 359 | 98% | 17.11 | 279 / 286 |
kidney | 98% | 2072.09 | 87 / 89 | 94% | 13.48 | 847 / 901 |
ovary | 100% | 3663.05 | 180 / 180 | 91% | 9.93 | 392 / 430 |
liver | 98% | 1570.56 | 222 / 226 | 89% | 10.49 | 361 / 406 |
adrenal gland | 100% | 4357.84 | 257 / 258 | 87% | 9.96 | 200 / 230 |
pancreas | 82% | 1186.22 | 269 / 328 | 99% | 15.77 | 176 / 178 |
adipose | 100% | 4840.44 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 9283.25 | 1335 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 8409.07 | 803 / 803 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.34 | 1 / 1 |
eye | 0% | 0 | 0 / 0 | 99% | 28.83 | 79 / 80 |
heart | 97% | 4771.12 | 839 / 861 | 0% | 0 | 0 / 0 |
spleen | 97% | 1629.21 | 234 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 93% | 18.80 | 42 / 45 |
peripheral blood | 61% | 1256.16 | 569 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 31% | 2.17 | 9 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0035459 | Biological process | vesicle cargo loading |
GO_0072383 | Biological process | plus-end-directed vesicle transport along microtubule |
GO_0006886 | Biological process | intracellular protein transport |
GO_0051301 | Biological process | cell division |
GO_0032438 | Biological process | melanosome organization |
GO_0008333 | Biological process | endosome to lysosome transport |
GO_0007018 | Biological process | microtubule-based movement |
GO_0043001 | Biological process | Golgi to plasma membrane protein transport |
GO_0032465 | Biological process | regulation of cytokinesis |
GO_0030705 | Biological process | cytoskeleton-dependent intracellular transport |
GO_0030496 | Cellular component | midbody |
GO_0005874 | Cellular component | microtubule |
GO_0005813 | Cellular component | centrosome |
GO_0005871 | Cellular component | kinesin complex |
GO_0032588 | Cellular component | trans-Golgi network membrane |
GO_0000139 | Cellular component | Golgi membrane |
GO_0010008 | Cellular component | endosome membrane |
GO_0003777 | Molecular function | microtubule motor activity |
GO_0008017 | Molecular function | microtubule binding |
GO_0005524 | Molecular function | ATP binding |
GO_0005515 | Molecular function | protein binding |
GO_0016887 | Molecular function | ATP hydrolysis activity |
Gene name | KIF13A |
Protein name | Kinesin family member 13A Kinesin-like protein KIF13A (Kinesin-like protein RBKIN) |
Synonyms | RBKIN |
Description | FUNCTION: Plus end-directed microtubule-dependent motor protein involved in intracellular transport and regulating various processes such as mannose-6-phosphate receptor (M6PR) transport to the plasma membrane, endosomal sorting during melanosome biogenesis and cytokinesis. Mediates the transport of M6PR-containing vesicles from trans-Golgi network to the plasma membrane via direct interaction with the AP-1 complex. During melanosome maturation, required for delivering melanogenic enzymes from recycling endosomes to nascent melanosomes by creating peripheral recycling endosomal subdomains in melanocytes. Also required for the abcission step in cytokinesis: mediates translocation of ZFYVE26, and possibly TTC19, to the midbody during cytokinesis. . |
Accessions | ENST00000378814.9 [Q9H1H9-3] ENST00000259711.11 [Q9H1H9-1] Q9H1H9 ENST00000502297.5 H0Y925 H0Y307 ENST00000378843.6 [Q9H1H9-4] ENST00000506044.1 ENST00000502704.2 [Q9H1H9-5] ENST00000378826.6 [Q9H1H9-2] ENST00000636847.1 ENST00000358380.10 H0Y9Z7 A0A1B0GUA8 |