Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 15 studies | 24% ± 6% | |
endothelial cell | 14 studies | 25% ± 8% | |
basal cell | 10 studies | 30% ± 11% | |
oligodendrocyte | 7 studies | 26% ± 7% | |
endothelial cell of lymphatic vessel | 6 studies | 21% ± 3% | |
pericyte | 6 studies | 18% ± 2% | |
epithelial cell | 6 studies | 40% ± 18% | |
mucosal invariant T cell | 6 studies | 16% ± 0% | |
smooth muscle cell | 5 studies | 18% ± 2% | |
regulatory T cell | 5 studies | 19% ± 3% | |
astrocyte | 5 studies | 23% ± 5% | |
abnormal cell | 4 studies | 19% ± 3% | |
ciliated cell | 4 studies | 29% ± 8% | |
luminal hormone-sensing cell of mammary gland | 4 studies | 21% ± 5% | |
glutamatergic neuron | 4 studies | 46% ± 10% | |
oligodendrocyte precursor cell | 4 studies | 31% ± 11% | |
connective tissue cell | 4 studies | 20% ± 2% | |
myofibroblast cell | 3 studies | 18% ± 1% | |
Mueller cell | 3 studies | 18% ± 1% | |
macrophage | 3 studies | 19% ± 1% | |
type I pneumocyte | 3 studies | 22% ± 2% | |
GABAergic neuron | 3 studies | 39% ± 7% | |
dendritic cell | 3 studies | 32% ± 11% | |
intestinal crypt stem cell | 3 studies | 18% ± 2% | |
melanocyte | 3 studies | 22% ± 2% | |
transit amplifying cell | 3 studies | 31% ± 20% | |
CD4-positive, alpha-beta memory T cell | 3 studies | 18% ± 2% | |
interneuron | 3 studies | 45% ± 10% | |
endothelial cell of vascular tree | 3 studies | 16% ± 0% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 4721.87 | 459 / 459 | 100% | 32.99 | 1118 / 1118 |
esophagus | 100% | 3879.83 | 1445 / 1445 | 100% | 29.58 | 183 / 183 |
brain | 100% | 3500.04 | 2640 / 2642 | 100% | 30.62 | 705 / 705 |
prostate | 100% | 3523.29 | 245 / 245 | 100% | 22.52 | 501 / 502 |
skin | 100% | 6060.05 | 1809 / 1809 | 100% | 32.36 | 471 / 472 |
uterus | 100% | 4348.64 | 170 / 170 | 100% | 26.28 | 458 / 459 |
kidney | 100% | 2611.42 | 89 / 89 | 100% | 33.03 | 899 / 901 |
lung | 100% | 3697.56 | 577 / 578 | 100% | 25.32 | 1153 / 1155 |
ovary | 100% | 3902.12 | 180 / 180 | 100% | 16.64 | 428 / 430 |
thymus | 100% | 3603.18 | 653 / 653 | 100% | 25.76 | 602 / 605 |
liver | 100% | 3649.27 | 226 / 226 | 99% | 18.89 | 403 / 406 |
bladder | 100% | 4221.00 | 21 / 21 | 99% | 21.74 | 500 / 504 |
adrenal gland | 100% | 3569.04 | 258 / 258 | 99% | 26.50 | 227 / 230 |
intestine | 100% | 3720.26 | 966 / 966 | 98% | 19.94 | 519 / 527 |
stomach | 99% | 2375.47 | 356 / 359 | 99% | 21.45 | 283 / 286 |
pancreas | 96% | 1560.05 | 314 / 328 | 99% | 21.86 | 176 / 178 |
adipose | 100% | 5022.84 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 5260.28 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 28.54 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 13.26 | 29 / 29 |
spleen | 100% | 1596.65 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 27.03 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 8.42 | 1 / 1 |
heart | 96% | 2226.39 | 826 / 861 | 0% | 0 | 0 / 0 |
muscle | 85% | 1164.19 | 686 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 33% | 644.06 | 309 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006666 | Biological process | 3-keto-sphinganine metabolic process |
GO_0030148 | Biological process | sphingolipid biosynthetic process |
GO_0005615 | Cellular component | extracellular space |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0070402 | Molecular function | NADPH binding |
GO_0005515 | Molecular function | protein binding |
GO_0047560 | Molecular function | 3-dehydrosphinganine reductase activity |
Gene name | KDSR |
Protein name | 3-ketodihydrosphingosine reductase 3-ketodihydrosphingosine reductase (KDS reductase) (EC 1.1.1.102) (3-dehydrosphinganine reductase) (Follicular variant translocation protein 1) (FVT-1) (Short chain dehydrogenase/reductase family 35C member 1) 3-dehydrosphinganine reductase (EC 1.1.1.102) |
Synonyms | FVT1 SDR35C1 |
Description | FUNCTION: Catalyzes the reduction of 3-ketodihydrosphingosine (KDS) to dihydrosphingosine (DHS). . |
Accessions | ENST00000591902.6 ENST00000646205.1 ENST00000326575.9 [Q06136-2] A0A2R8YF70 ENST00000644624.1 A0A2R8Y7U3 K7EQS7 ENST00000592327.1 Q06136 ENST00000645214.2 [Q06136-1] K7ERC8 |