Name | Number of supported studies | Average coverage | |
---|---|---|---|
natural killer cell | 13 studies | 25% ± 7% | |
mast cell | 12 studies | 25% ± 9% | |
fibroblast | 12 studies | 21% ± 5% | |
B cell | 11 studies | 20% ± 7% | |
endothelial cell | 11 studies | 23% ± 5% | |
T cell | 9 studies | 24% ± 7% | |
CD4-positive, alpha-beta T cell | 8 studies | 21% ± 3% | |
CD8-positive, alpha-beta T cell | 8 studies | 19% ± 4% | |
naive B cell | 8 studies | 23% ± 5% | |
endothelial cell of lymphatic vessel | 6 studies | 23% ± 3% | |
monocyte | 5 studies | 19% ± 4% | |
mature NK T cell | 5 studies | 22% ± 4% | |
epithelial cell | 5 studies | 24% ± 13% | |
macrophage | 5 studies | 20% ± 4% | |
dendritic cell | 4 studies | 23% ± 6% | |
GABAergic neuron | 4 studies | 29% ± 11% | |
glutamatergic neuron | 4 studies | 36% ± 9% | |
astrocyte | 4 studies | 24% ± 8% | |
hematopoietic precursor cell | 3 studies | 33% ± 2% | |
gamma-delta T cell | 3 studies | 32% ± 15% | |
memory B cell | 3 studies | 21% ± 3% | |
smooth muscle cell | 3 studies | 21% ± 3% | |
basal cell | 3 studies | 19% ± 3% | |
interneuron | 3 studies | 27% ± 5% | |
oligodendrocyte | 3 studies | 26% ± 3% | |
CD16-negative, CD56-bright natural killer cell, human | 3 studies | 22% ± 4% | |
regulatory T cell | 3 studies | 27% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 2901.57 | 459 / 459 | 100% | 16.67 | 1118 / 1118 |
esophagus | 100% | 2041.60 | 1445 / 1445 | 100% | 13.21 | 183 / 183 |
lung | 100% | 2608.41 | 578 / 578 | 100% | 14.05 | 1155 / 1155 |
ovary | 100% | 2705.51 | 180 / 180 | 100% | 11.72 | 430 / 430 |
prostate | 100% | 2508.37 | 245 / 245 | 100% | 12.85 | 502 / 502 |
intestine | 100% | 2434.80 | 966 / 966 | 100% | 11.06 | 526 / 527 |
uterus | 100% | 2954.02 | 170 / 170 | 100% | 13.67 | 458 / 459 |
bladder | 100% | 2466.14 | 21 / 21 | 100% | 11.49 | 502 / 504 |
brain | 100% | 1842.74 | 2631 / 2642 | 100% | 8.90 | 705 / 705 |
thymus | 100% | 2701.77 | 653 / 653 | 100% | 10.11 | 602 / 605 |
stomach | 100% | 1594.29 | 359 / 359 | 99% | 10.62 | 284 / 286 |
liver | 100% | 1148.33 | 226 / 226 | 99% | 6.28 | 403 / 406 |
kidney | 100% | 1551.01 | 89 / 89 | 98% | 7.64 | 886 / 901 |
skin | 100% | 2208.70 | 1809 / 1809 | 97% | 10.77 | 458 / 472 |
adrenal gland | 100% | 1929.83 | 258 / 258 | 97% | 5.89 | 222 / 230 |
pancreas | 97% | 890.54 | 319 / 328 | 99% | 9.85 | 176 / 178 |
adipose | 100% | 2627.85 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2528.03 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 14.29 | 29 / 29 |
muscle | 100% | 1756.00 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 3481.57 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 12.86 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.00 | 1 / 1 |
heart | 99% | 1150.34 | 850 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 97% | 1674.68 | 897 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 81% | 4.14 | 65 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007005 | Biological process | mitochondrion organization |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0005654 | Cellular component | nucleoplasm |
GO_0036464 | Cellular component | cytoplasmic ribonucleoprotein granule |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
GO_0000976 | Molecular function | transcription cis-regulatory region binding |
Gene name | GABPB1 |
Protein name | GA binding protein transcription factor subunit beta 1 GA binding protein transcription factor beta subunit 1 transcript variant gamma-2 (GA binding protein transcription factor subunit beta 1) (GA binding protein transcription factor, beta subunit 2, isoform CRA_c) GA-binding protein subunit beta-1 (GABP subunit beta-1) (GABPB-1) (GABP subunit beta-2) (GABPB-2) (Nuclear respiratory factor 2) (Transcription factor E4TF1-47) (Transcription factor E4TF1-53) |
Synonyms | hCG_2002404 GABPB2 GABPB E4TF1B |
Description | FUNCTION: Transcription factor capable of interacting with purine rich repeats (GA repeats) . Acts as a master regulator of nuclear-encoded mitochondrial genes (By similarity). .; FUNCTION: (Microbial infection) Necessary for the expression of the Adenovirus E4 gene. . |
Accessions | ENST00000359031.8 [Q06547-4] H9ZYI9 H0YMZ5 ENST00000558970.2 ENST00000429662.6 [Q06547-3] ENST00000396464.7 [Q06547-4] ENST00000560825.5 ENST00000380877.8 [Q06547-2] ENST00000220429.12 [Q06547-1] ENST00000561010.5 F5H7I4 ENST00000558335.5 H0YNZ0 Q06547 ENST00000543881.5 |