Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 35 studies | 32% ± 18% | |
macrophage | 32 studies | 43% ± 24% | |
endothelial cell of lymphatic vessel | 20 studies | 44% ± 20% | |
fibroblast | 16 studies | 29% ± 12% | |
oligodendrocyte | 16 studies | 78% ± 12% | |
microglial cell | 16 studies | 41% ± 16% | |
oligodendrocyte precursor cell | 14 studies | 36% ± 13% | |
basal cell | 11 studies | 37% ± 23% | |
mast cell | 11 studies | 38% ± 16% | |
pericyte | 10 studies | 45% ± 15% | |
myeloid cell | 10 studies | 54% ± 23% | |
type II pneumocyte | 9 studies | 48% ± 25% | |
mesothelial cell | 9 studies | 36% ± 15% | |
GABAergic neuron | 9 studies | 37% ± 15% | |
endothelial cell of artery | 8 studies | 29% ± 12% | |
epithelial cell | 8 studies | 36% ± 25% | |
dendritic cell | 8 studies | 35% ± 14% | |
ciliated cell | 8 studies | 30% ± 18% | |
capillary endothelial cell | 7 studies | 22% ± 4% | |
retinal cone cell | 7 studies | 64% ± 24% | |
mononuclear phagocyte | 6 studies | 36% ± 15% | |
glutamatergic neuron | 6 studies | 36% ± 16% | |
club cell | 6 studies | 26% ± 9% | |
retinal rod cell | 6 studies | 44% ± 17% | |
secretory cell | 6 studies | 25% ± 7% | |
astrocyte | 5 studies | 34% ± 17% | |
interneuron | 5 studies | 29% ± 15% | |
monocyte | 5 studies | 44% ± 12% | |
cardiac muscle cell | 5 studies | 20% ± 2% | |
vein endothelial cell | 5 studies | 30% ± 14% | |
endothelial cell of vascular tree | 5 studies | 27% ± 12% | |
smooth muscle cell | 4 studies | 27% ± 9% | |
conventional dendritic cell | 4 studies | 21% ± 4% | |
type I pneumocyte | 4 studies | 24% ± 6% | |
leukocyte | 4 studies | 26% ± 12% | |
regulatory T cell | 4 studies | 21% ± 4% | |
T cell | 3 studies | 27% ± 14% | |
GABAergic interneuron | 3 studies | 35% ± 24% | |
granule cell | 3 studies | 19% ± 1% | |
progenitor cell | 3 studies | 33% ± 13% | |
squamous epithelial cell | 3 studies | 40% ± 20% | |
CD4-positive, alpha-beta T cell | 3 studies | 17% ± 1% | |
endocardial cell | 3 studies | 40% ± 12% | |
tissue-resident macrophage | 3 studies | 48% ± 18% | |
lymphocyte | 3 studies | 25% ± 2% | |
retinal pigment epithelial cell | 3 studies | 24% ± 4% | |
neuron | 3 studies | 45% ± 21% | |
alveolar macrophage | 3 studies | 41% ± 4% | |
myofibroblast cell | 3 studies | 31% ± 15% | |
transit amplifying cell | 3 studies | 43% ± 35% | |
platelet | 3 studies | 20% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 100% | 3949.62 | 578 / 578 | 99% | 10.04 | 1147 / 1155 |
prostate | 100% | 2366.56 | 245 / 245 | 99% | 12.63 | 496 / 502 |
thymus | 100% | 5610.89 | 652 / 653 | 99% | 20.75 | 598 / 605 |
breast | 98% | 1883.51 | 451 / 459 | 96% | 8.47 | 1077 / 1118 |
kidney | 100% | 2069.81 | 89 / 89 | 93% | 14.93 | 839 / 901 |
uterus | 98% | 1185.25 | 166 / 170 | 94% | 10.32 | 433 / 459 |
esophagus | 86% | 2397.44 | 1239 / 1445 | 100% | 14.33 | 183 / 183 |
liver | 100% | 1566.15 | 226 / 226 | 85% | 5.10 | 346 / 406 |
ovary | 84% | 1163.18 | 152 / 180 | 99% | 13.43 | 427 / 430 |
stomach | 88% | 870.31 | 317 / 359 | 94% | 6.40 | 268 / 286 |
intestine | 86% | 1076.70 | 827 / 966 | 91% | 6.03 | 481 / 527 |
bladder | 81% | 735.52 | 17 / 21 | 86% | 6.42 | 434 / 504 |
brain | 73% | 1296.95 | 1917 / 2642 | 93% | 6.52 | 656 / 705 |
skin | 72% | 3445.67 | 1305 / 1809 | 93% | 10.77 | 440 / 472 |
pancreas | 67% | 545.90 | 219 / 328 | 97% | 10.56 | 173 / 178 |
adrenal gland | 75% | 606.86 | 193 / 258 | 62% | 3.46 | 142 / 230 |
spleen | 100% | 4261.01 | 241 / 241 | 0% | 0 | 0 / 0 |
adipose | 99% | 2309.61 | 1197 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 10.51 | 44 / 45 |
blood vessel | 91% | 1739.05 | 1209 / 1335 | 0% | 0 | 0 / 0 |
heart | 83% | 1168.99 | 713 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 72% | 4.57 | 21 / 29 |
peripheral blood | 63% | 1197.22 | 587 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 29% | 1.47 | 23 / 80 |
muscle | 9% | 68.02 | 71 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0090162 | Biological process | establishment of epithelial cell polarity |
GO_0001726 | Cellular component | ruffle |
GO_0005615 | Cellular component | extracellular space |
GO_0005856 | Cellular component | cytoskeleton |
GO_0005912 | Cellular component | adherens junction |
GO_0005737 | Cellular component | cytoplasm |
GO_0005923 | Cellular component | bicellular tight junction |
Gene name | FRMD4B |
Protein name | FERM domain-containing protein 4B (GRP1-binding protein GRSP1) FRMD4B protein FERM domain containing 4B |
Synonyms | GRSP1 KIAA1013 |
Description | FUNCTION: Member of GRP1 signaling complexes that are acutely recruited to plasma membrane ruffles in response to insulin receptor signaling. May function as a scaffolding protein that regulates epithelial cell polarity by connecting ARF6 activation with the PAR3 complex. Plays a redundant role with FRMD4A in epithelial polarization. . |
Accessions | Q6PEW6 C9JA15 Q2TB00 ENST00000473029.5 C9J6Q2 Q9Y2L6 ENST00000478263.5 ENST00000462512.1 ENST00000459638.5 ENST00000460709.5 H7C550 C9JYK2 C9JBX2 ENST00000398540.8 [Q9Y2L6-1] E9PGA7 C9JAW0 C9J7M5 ENST00000497880.5 ENST00000493880.5 ENST00000489817.1 |