Name | Number of supported studies | Average coverage | |
---|---|---|---|
type I pneumocyte | 11 studies | 33% ± 10% | |
type II pneumocyte | 9 studies | 25% ± 10% | |
mesothelial cell | 6 studies | 33% ± 16% | |
GABAergic neuron | 4 studies | 27% ± 7% | |
oligodendrocyte precursor cell | 4 studies | 18% ± 2% | |
glutamatergic neuron | 3 studies | 37% ± 8% | |
basal cell | 3 studies | 23% ± 3% | |
interneuron | 3 studies | 24% ± 11% |
Insufficient scRNA-seq data for expression of FLRT3 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 93% | 477.57 | 610 / 653 | 86% | 27.12 | 521 / 605 |
lung | 99% | 2286.44 | 575 / 578 | 79% | 20.83 | 908 / 1155 |
kidney | 100% | 1912.89 | 89 / 89 | 76% | 46.95 | 688 / 901 |
prostate | 96% | 1366.72 | 235 / 245 | 70% | 11.85 | 351 / 502 |
brain | 83% | 585.82 | 2188 / 2642 | 67% | 6.82 | 473 / 705 |
bladder | 86% | 312.95 | 18 / 21 | 64% | 14.90 | 321 / 504 |
liver | 98% | 676.26 | 221 / 226 | 51% | 8.30 | 209 / 406 |
stomach | 96% | 1016.91 | 344 / 359 | 53% | 10.03 | 152 / 286 |
ovary | 89% | 608.18 | 161 / 180 | 44% | 5.88 | 191 / 430 |
pancreas | 46% | 127.77 | 151 / 328 | 78% | 11.92 | 139 / 178 |
intestine | 78% | 256.11 | 754 / 966 | 42% | 5.27 | 221 / 527 |
skin | 84% | 551.04 | 1525 / 1809 | 30% | 7.29 | 141 / 472 |
esophagus | 45% | 126.74 | 655 / 1445 | 64% | 13.28 | 118 / 183 |
uterus | 56% | 141.18 | 95 / 170 | 51% | 10.19 | 234 / 459 |
ureter | 0% | 0 | 0 / 0 | 100% | 11.26 | 1 / 1 |
breast | 39% | 101.86 | 179 / 459 | 41% | 6.88 | 454 / 1118 |
adrenal gland | 22% | 82.27 | 56 / 258 | 49% | 9.33 | 113 / 230 |
muscle | 42% | 101.96 | 339 / 803 | 0% | 0 | 0 / 0 |
adipose | 36% | 459.17 | 431 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 29% | 4.93 | 13 / 45 |
heart | 9% | 37.96 | 81 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 6% | 14.87 | 76 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.33 | 1 / 29 |
spleen | 1% | 2.02 | 3 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 1% | 2.99 | 9 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0098742 | Biological process | cell-cell adhesion via plasma-membrane adhesion molecules |
GO_0003345 | Biological process | proepicardium cell migration involved in pericardium morphogenesis |
GO_0060322 | Biological process | head development |
GO_0007507 | Biological process | heart development |
GO_0031175 | Biological process | neuron projection development |
GO_0048678 | Biological process | response to axon injury |
GO_0099560 | Biological process | synaptic membrane adhesion |
GO_0050919 | Biological process | negative chemotaxis |
GO_0048598 | Biological process | embryonic morphogenesis |
GO_1990138 | Biological process | neuron projection extension |
GO_0007416 | Biological process | synapse assembly |
GO_0051965 | Biological process | positive regulation of synapse assembly |
GO_0007411 | Biological process | axon guidance |
GO_0008543 | Biological process | fibroblast growth factor receptor signaling pathway |
GO_0005615 | Cellular component | extracellular space |
GO_0098978 | Cellular component | glutamatergic synapse |
GO_0005886 | Cellular component | plasma membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0097060 | Cellular component | synaptic membrane |
GO_0043679 | Cellular component | axon terminus |
GO_0031012 | Cellular component | extracellular matrix |
GO_0005925 | Cellular component | focal adhesion |
GO_0005911 | Cellular component | cell-cell junction |
GO_0005829 | Cellular component | cytosol |
GO_0014069 | Cellular component | postsynaptic density |
GO_0044295 | Cellular component | axonal growth cone |
GO_0045211 | Cellular component | postsynaptic membrane |
GO_0030054 | Cellular component | cell junction |
GO_0032584 | Cellular component | growth cone membrane |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0005104 | Molecular function | fibroblast growth factor receptor binding |
GO_0030674 | Molecular function | protein-macromolecule adaptor activity |
GO_0045499 | Molecular function | chemorepellent activity |
GO_0005515 | Molecular function | protein binding |
Gene name | FLRT3 |
Protein name | Leucine-rich repeat transmembrane protein FLRT3 (Fibronectin-like domain-containing leucine-rich transmembrane protein 3) |
Synonyms | UNQ856/PRO1865 KIAA1469 |
Description | FUNCTION: Functions in cell-cell adhesion, cell migration and axon guidance, exerting an attractive or repulsive role depending on its interaction partners. Plays a role in the spatial organization of brain neurons. Plays a role in vascular development in the retina (By similarity). Plays a role in cell-cell adhesion via its interaction with ADGRL3 and probably also other latrophilins that are expressed at the surface of adjacent cells . Interaction with the intracellular domain of ROBO1 mediates axon attraction towards cells expressing NTN1. Mediates axon growth cone collapse and plays a repulsive role in neuron guidance via its interaction with UNC5B, and possibly also other UNC-5 family members (By similarity). Promotes neurite outgrowth (in vitro) . Mediates cell-cell contacts that promote an increase both in neurite number and in neurite length. Plays a role in the regulation of the density of glutamaergic synapses. Plays a role in fibroblast growth factor-mediated signaling cascades. Required for normal morphogenesis during embryonic development, but not for normal embryonic patterning. Required for normal ventral closure, headfold fusion and definitive endoderm migration during embryonic development. Required for the formation of a normal basement membrane and the maintenance of a normal anterior visceral endoderm during embryonic development (By similarity). . |
Accessions | ENST00000378053.3 Q9NZU0 ENST00000341420.5 |