Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 25 studies | 49% ± 18% | |
astrocyte | 19 studies | 52% ± 19% | |
oligodendrocyte | 16 studies | 72% ± 18% | |
oligodendrocyte precursor cell | 14 studies | 55% ± 18% | |
microglial cell | 14 studies | 49% ± 17% | |
glutamatergic neuron | 13 studies | 69% ± 22% | |
mast cell | 12 studies | 47% ± 19% | |
GABAergic neuron | 11 studies | 69% ± 22% | |
macrophage | 11 studies | 43% ± 18% | |
fibroblast | 11 studies | 45% ± 11% | |
smooth muscle cell | 11 studies | 39% ± 15% | |
pericyte | 10 studies | 42% ± 16% | |
adipocyte | 9 studies | 57% ± 13% | |
mesothelial cell | 8 studies | 41% ± 14% | |
epithelial cell | 7 studies | 45% ± 24% | |
endothelial cell of lymphatic vessel | 7 studies | 37% ± 11% | |
neuron | 6 studies | 65% ± 20% | |
interneuron | 6 studies | 79% ± 13% | |
cardiac muscle cell | 6 studies | 75% ± 18% | |
basal cell | 6 studies | 48% ± 25% | |
T cell | 5 studies | 26% ± 7% | |
myeloid cell | 5 studies | 35% ± 14% | |
type I pneumocyte | 5 studies | 54% ± 9% | |
type II pneumocyte | 5 studies | 35% ± 7% | |
granule cell | 4 studies | 65% ± 7% | |
dendritic cell | 4 studies | 23% ± 3% | |
endothelial cell of artery | 4 studies | 38% ± 16% | |
vein endothelial cell | 4 studies | 35% ± 17% | |
Mueller cell | 4 studies | 48% ± 16% | |
amacrine cell | 4 studies | 63% ± 18% | |
retina horizontal cell | 4 studies | 51% ± 21% | |
retinal cone cell | 4 studies | 50% ± 14% | |
retinal ganglion cell | 4 studies | 66% ± 21% | |
retinal rod cell | 4 studies | 44% ± 10% | |
ciliated cell | 4 studies | 34% ± 13% | |
club cell | 4 studies | 39% ± 9% | |
monocyte | 4 studies | 29% ± 9% | |
cholangiocyte | 3 studies | 45% ± 17% | |
differentiation-committed oligodendrocyte precursor | 3 studies | 59% ± 9% | |
GABAergic interneuron | 3 studies | 77% ± 0% | |
glial cell | 3 studies | 47% ± 12% | |
progenitor cell | 3 studies | 49% ± 15% | |
CD4-positive, alpha-beta T cell | 3 studies | 20% ± 3% | |
GABAergic amacrine cell | 3 studies | 68% ± 17% | |
OFF-bipolar cell | 3 studies | 47% ± 19% | |
ON-bipolar cell | 3 studies | 49% ± 20% | |
glycinergic amacrine cell | 3 studies | 58% ± 15% | |
endothelial cell of vascular tree | 3 studies | 54% ± 16% | |
hepatocyte | 3 studies | 51% ± 17% | |
retinal pigment epithelial cell | 3 studies | 48% ± 29% | |
ependymal cell | 3 studies | 58% ± 20% | |
B cell | 3 studies | 23% ± 10% | |
alveolar macrophage | 3 studies | 38% ± 6% | |
capillary endothelial cell | 3 studies | 41% ± 13% | |
respiratory goblet cell | 3 studies | 46% ± 16% | |
muscle cell | 3 studies | 45% ± 31% | |
mucus secreting cell | 3 studies | 43% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2906.91 | 1444 / 1445 | 100% | 20.80 | 183 / 183 |
brain | 100% | 3898.49 | 2642 / 2642 | 100% | 21.61 | 703 / 705 |
prostate | 100% | 2082.09 | 245 / 245 | 99% | 10.76 | 496 / 502 |
breast | 100% | 2627.34 | 459 / 459 | 98% | 13.17 | 1101 / 1118 |
skin | 100% | 5652.00 | 1808 / 1809 | 99% | 13.85 | 465 / 472 |
bladder | 100% | 2825.33 | 21 / 21 | 97% | 12.97 | 491 / 504 |
lung | 99% | 2136.61 | 575 / 578 | 98% | 13.60 | 1127 / 1155 |
thymus | 100% | 1918.98 | 651 / 653 | 97% | 12.98 | 589 / 605 |
uterus | 100% | 3018.17 | 170 / 170 | 97% | 15.35 | 444 / 459 |
adrenal gland | 100% | 3773.84 | 258 / 258 | 96% | 11.48 | 221 / 230 |
kidney | 100% | 1438.39 | 89 / 89 | 95% | 10.27 | 860 / 901 |
stomach | 97% | 1520.34 | 350 / 359 | 94% | 7.26 | 270 / 286 |
intestine | 100% | 2293.96 | 966 / 966 | 91% | 6.29 | 482 / 527 |
ovary | 100% | 3201.95 | 180 / 180 | 80% | 4.90 | 345 / 430 |
pancreas | 79% | 704.09 | 258 / 328 | 98% | 10.12 | 174 / 178 |
adipose | 100% | 2825.22 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2708.23 | 1335 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 16.69 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 12.97 | 1 / 1 |
spleen | 100% | 1156.37 | 240 / 241 | 0% | 0 | 0 / 0 |
muscle | 99% | 1479.80 | 793 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 14.85 | 79 / 80 |
heart | 99% | 5552.27 | 850 / 861 | 0% | 0 | 0 / 0 |
liver | 45% | 343.62 | 101 / 226 | 52% | 3.43 | 211 / 406 |
lymph node | 0% | 0 | 0 / 0 | 28% | 1.10 | 8 / 29 |
peripheral blood | 7% | 51.11 | 61 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0090522 | Biological process | vesicle tethering involved in exocytosis |
GO_0006904 | Biological process | vesicle docking involved in exocytosis |
GO_0006886 | Biological process | intracellular protein transport |
GO_0006887 | Biological process | exocytosis |
GO_0000281 | Biological process | mitotic cytokinesis |
GO_0006893 | Biological process | Golgi to plasma membrane transport |
GO_0090148 | Biological process | membrane fission |
GO_0000145 | Cellular component | exocyst |
GO_0005515 | Molecular function | protein binding |
Gene name | EXOC6B |
Protein name | Exocyst complex component Exocyst complex component 6B (Exocyst complex component Sec15B) (SEC15-like protein 2) Exocyst complex component 6B |
Synonyms | KIAA0919 SEC15B SEC15L2 |
Description | FUNCTION: Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. FUNCTION: Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. . FUNCTION: Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. . |
Accessions | J3QT38 ENST00000272427.11 [Q9Y2D4-1] ENST00000410104.1 Q9Y2D4 A0A0U1RRB6 ENST00000410112.6 ENST00000634650.1 F8W6R7 |