Name | Number of supported studies | Average coverage | |
---|---|---|---|
B cell | 18 studies | 26% ± 10% | |
astrocyte | 17 studies | 37% ± 20% | |
endothelial cell | 16 studies | 32% ± 14% | |
oligodendrocyte | 15 studies | 42% ± 16% | |
glutamatergic neuron | 13 studies | 43% ± 26% | |
macrophage | 13 studies | 36% ± 17% | |
oligodendrocyte precursor cell | 12 studies | 36% ± 18% | |
microglial cell | 12 studies | 32% ± 12% | |
naive B cell | 12 studies | 21% ± 4% | |
GABAergic neuron | 11 studies | 45% ± 24% | |
memory B cell | 10 studies | 18% ± 1% | |
fibroblast | 9 studies | 27% ± 10% | |
adipocyte | 8 studies | 34% ± 10% | |
epithelial cell | 7 studies | 32% ± 19% | |
myeloid cell | 7 studies | 28% ± 10% | |
neuron | 6 studies | 38% ± 15% | |
interneuron | 6 studies | 55% ± 24% | |
pericyte | 6 studies | 33% ± 14% | |
dendritic cell | 6 studies | 26% ± 8% | |
plasmacytoid dendritic cell | 6 studies | 25% ± 11% | |
retinal ganglion cell | 5 studies | 29% ± 16% | |
endothelial cell of lymphatic vessel | 5 studies | 24% ± 7% | |
monocyte | 5 studies | 24% ± 6% | |
smooth muscle cell | 5 studies | 26% ± 3% | |
type I pneumocyte | 5 studies | 26% ± 9% | |
type II pneumocyte | 5 studies | 23% ± 8% | |
granule cell | 4 studies | 31% ± 5% | |
retinal pigment epithelial cell | 4 studies | 45% ± 21% | |
cardiac muscle cell | 4 studies | 25% ± 2% | |
ciliated cell | 4 studies | 22% ± 4% | |
amacrine cell | 4 studies | 34% ± 14% | |
club cell | 4 studies | 27% ± 9% | |
basal cell | 4 studies | 32% ± 26% | |
mast cell | 4 studies | 21% ± 8% | |
classical monocyte | 3 studies | 18% ± 2% | |
GABAergic interneuron | 3 studies | 43% ± 2% | |
plasma cell | 3 studies | 22% ± 3% | |
GABAergic amacrine cell | 3 studies | 34% ± 16% | |
Mueller cell | 3 studies | 31% ± 13% | |
glycinergic amacrine cell | 3 studies | 31% ± 8% | |
retina horizontal cell | 3 studies | 33% ± 12% | |
retinal rod cell | 3 studies | 25% ± 4% | |
hepatocyte | 3 studies | 49% ± 18% | |
ependymal cell | 3 studies | 42% ± 15% | |
T cell | 3 studies | 18% ± 2% | |
alveolar macrophage | 3 studies | 38% ± 7% | |
lymphocyte | 3 studies | 24% ± 7% | |
mesothelial cell | 3 studies | 33% ± 7% | |
abnormal cell | 3 studies | 28% ± 13% | |
mucus secreting cell | 3 studies | 25% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 6678.43 | 245 / 245 | 100% | 49.76 | 501 / 502 |
brain | 100% | 2208.95 | 2629 / 2642 | 99% | 11.53 | 700 / 705 |
esophagus | 100% | 2701.65 | 1445 / 1445 | 98% | 11.77 | 180 / 183 |
thymus | 100% | 3510.58 | 653 / 653 | 98% | 13.58 | 594 / 605 |
kidney | 100% | 2410.90 | 89 / 89 | 97% | 15.67 | 872 / 901 |
breast | 100% | 3095.61 | 459 / 459 | 96% | 13.32 | 1071 / 1118 |
lung | 100% | 2464.27 | 577 / 578 | 95% | 7.57 | 1100 / 1155 |
pancreas | 100% | 2299.98 | 328 / 328 | 95% | 8.39 | 169 / 178 |
adrenal gland | 100% | 2477.85 | 258 / 258 | 94% | 7.78 | 217 / 230 |
skin | 100% | 3141.22 | 1809 / 1809 | 93% | 13.53 | 438 / 472 |
stomach | 100% | 2340.86 | 359 / 359 | 92% | 7.89 | 264 / 286 |
uterus | 100% | 2998.62 | 170 / 170 | 91% | 7.07 | 418 / 459 |
intestine | 100% | 2662.09 | 966 / 966 | 87% | 6.04 | 456 / 527 |
ovary | 100% | 2943.16 | 180 / 180 | 86% | 4.89 | 371 / 430 |
bladder | 100% | 2432.76 | 21 / 21 | 84% | 5.86 | 424 / 504 |
liver | 100% | 1400.40 | 226 / 226 | 65% | 4.01 | 263 / 406 |
adipose | 100% | 2875.48 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3519.14 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 2320.55 | 241 / 241 | 0% | 0 | 0 / 0 |
muscle | 100% | 1550.36 | 801 / 803 | 0% | 0 | 0 / 0 |
heart | 94% | 1481.71 | 806 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 93% | 12.40 | 27 / 29 |
tonsil | 0% | 0 | 0 / 0 | 91% | 9.98 | 41 / 45 |
eye | 0% | 0 | 0 / 0 | 68% | 8.18 | 54 / 80 |
peripheral blood | 58% | 1999.35 | 535 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007035 | Biological process | vacuolar acidification |
GO_0043291 | Cellular component | RAVE complex |
Gene name | DMXL1 |
Protein name | DmX-like protein 1 (X-like 1 protein) Dmx like 1 DmX-like protein 1 DMXL1 protein |
Synonyms | XL1 |
Description | |
Accessions | ENST00000311085.8 E7EMZ0 B2RWN7 ENST00000503802.5 F1T0K4 F5H269 ENST00000539542.6 Q05C95 Q9Y485 |