Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 13 studies | 29% ± 10% | |
astrocyte | 10 studies | 28% ± 13% | |
microglial cell | 9 studies | 25% ± 8% | |
oligodendrocyte precursor cell | 9 studies | 27% ± 12% | |
oligodendrocyte | 9 studies | 31% ± 10% | |
glutamatergic neuron | 8 studies | 37% ± 23% | |
fibroblast | 8 studies | 23% ± 9% | |
GABAergic neuron | 7 studies | 37% ± 17% | |
macrophage | 7 studies | 29% ± 10% | |
natural killer cell | 6 studies | 18% ± 2% | |
B cell | 6 studies | 19% ± 3% | |
dendritic cell | 6 studies | 21% ± 6% | |
CD4-positive, alpha-beta T cell | 5 studies | 17% ± 2% | |
epithelial cell | 5 studies | 37% ± 12% | |
endothelial cell of lymphatic vessel | 5 studies | 26% ± 7% | |
interneuron | 5 studies | 40% ± 22% | |
effector memory CD8-positive, alpha-beta T cell | 4 studies | 17% ± 1% | |
neuron | 4 studies | 28% ± 13% | |
amacrine cell | 4 studies | 19% ± 3% | |
adipocyte | 4 studies | 23% ± 5% | |
ciliated cell | 4 studies | 20% ± 4% | |
lymphocyte | 4 studies | 25% ± 8% | |
retinal rod cell | 4 studies | 20% ± 4% | |
basal cell | 4 studies | 27% ± 17% | |
club cell | 4 studies | 22% ± 7% | |
pericyte | 4 studies | 24% ± 6% | |
smooth muscle cell | 4 studies | 21% ± 2% | |
type II pneumocyte | 4 studies | 18% ± 4% | |
leukocyte | 3 studies | 22% ± 4% | |
CD16-negative, CD56-bright natural killer cell, human | 3 studies | 18% ± 0% | |
hematopoietic precursor cell | 3 studies | 20% ± 5% | |
GABAergic interneuron | 3 studies | 19% ± 3% | |
myeloid cell | 3 studies | 20% ± 1% | |
glycinergic amacrine cell | 3 studies | 18% ± 1% | |
retina horizontal cell | 3 studies | 19% ± 4% | |
neural progenitor cell | 3 studies | 24% ± 4% | |
connective tissue cell | 3 studies | 16% ± 0% | |
T cell | 3 studies | 19% ± 3% | |
alveolar macrophage | 3 studies | 20% ± 5% | |
monocyte | 3 studies | 21% ± 2% | |
type I pneumocyte | 3 studies | 22% ± 5% | |
goblet cell | 3 studies | 35% ± 25% | |
transit amplifying cell | 3 studies | 40% ± 26% | |
mast cell | 3 studies | 18% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1489.86 | 1445 / 1445 | 100% | 20.14 | 183 / 183 |
lung | 100% | 1898.24 | 578 / 578 | 100% | 15.72 | 1155 / 1155 |
ovary | 100% | 2384.38 | 180 / 180 | 100% | 13.20 | 428 / 430 |
breast | 100% | 2288.69 | 459 / 459 | 99% | 16.90 | 1112 / 1118 |
thymus | 100% | 1895.09 | 653 / 653 | 99% | 12.49 | 601 / 605 |
prostate | 100% | 1762.48 | 245 / 245 | 99% | 11.71 | 497 / 502 |
brain | 99% | 1187.70 | 2614 / 2642 | 100% | 14.71 | 705 / 705 |
uterus | 100% | 2430.55 | 170 / 170 | 99% | 16.58 | 453 / 459 |
pancreas | 99% | 915.45 | 326 / 328 | 98% | 10.99 | 175 / 178 |
bladder | 100% | 1816.52 | 21 / 21 | 98% | 11.77 | 492 / 504 |
stomach | 100% | 1191.04 | 359 / 359 | 97% | 12.17 | 277 / 286 |
intestine | 100% | 1791.83 | 966 / 966 | 97% | 10.99 | 509 / 527 |
kidney | 100% | 1178.45 | 89 / 89 | 96% | 12.34 | 869 / 901 |
adrenal gland | 100% | 1280.05 | 258 / 258 | 91% | 7.21 | 209 / 230 |
skin | 100% | 2111.34 | 1809 / 1809 | 91% | 12.28 | 428 / 472 |
liver | 100% | 768.04 | 226 / 226 | 77% | 5.26 | 312 / 406 |
blood vessel | 100% | 1795.65 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 10.37 | 29 / 29 |
spleen | 100% | 1857.49 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 17.29 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 5.18 | 1 / 1 |
adipose | 100% | 2171.56 | 1203 / 1204 | 0% | 0 | 0 / 0 |
muscle | 100% | 885.57 | 799 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 878.54 | 845 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 78% | 1342.82 | 726 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 57% | 4.25 | 46 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0046827 | Biological process | positive regulation of protein export from nucleus |
GO_0006611 | Biological process | protein export from nucleus |
GO_0030514 | Biological process | negative regulation of BMP signaling pathway |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005654 | Cellular component | nucleoplasm |
GO_0008420 | Molecular function | RNA polymerase II CTD heptapeptide repeat phosphatase activity |
GO_0004721 | Molecular function | phosphoprotein phosphatase activity |
GO_0005515 | Molecular function | protein binding |
Gene name | CTDSPL2 |
Protein name | CTD small phosphatase-like protein 2 (CTDSP-like 2) (EC 3.1.3.-) CTD small phosphatase like 2 Alternative protein CTDSPL2 |
Synonyms | HSPC058 HSPC129 |
Description | FUNCTION: Probable phosphatase. . |
Accessions | H0YNU2 Q05D32 ENST00000558373.5 [Q05D32-2] ENST00000560620.1 H0YMB4 ENST00000559793.5 ENST00000558791.5 ENST00000558968.1 ENST00000260327.9 [Q05D32-1] H0YNW9 L8E9X2 H0YMH7 ENST00000558966.5 [Q05D32-1] |