Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| astrocyte | 18 studies | 49% ± 23% | |
| oligodendrocyte precursor cell | 12 studies | 47% ± 18% | |
| retinal rod cell | 8 studies | 36% ± 14% | |
| retinal cone cell | 7 studies | 45% ± 16% | |
| GABAergic neuron | 7 studies | 41% ± 22% | |
| oligodendrocyte | 7 studies | 31% ± 10% | |
| Mueller cell | 6 studies | 67% ± 27% | |
| glutamatergic neuron | 4 studies | 45% ± 18% | |
| interneuron | 4 studies | 43% ± 17% | |
| ependymal cell | 3 studies | 70% ± 14% | |
| granule cell | 3 studies | 20% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 100% | 879.73 | 2638 / 2642 | 98% | 13.65 | 694 / 705 |
| ovary | 48% | 67.32 | 87 / 180 | 1% | 0.04 | 3 / 430 |
| muscle | 25% | 31.58 | 203 / 803 | 0% | 0 | 0 / 0 |
| adrenal gland | 0% | 0.83 | 1 / 258 | 10% | 0.27 | 24 / 230 |
| skin | 0% | 0.34 | 4 / 1809 | 8% | 1.00 | 37 / 472 |
| eye | 0% | 0 | 0 / 0 | 5% | 0.24 | 4 / 80 |
| uterus | 1% | 1.06 | 2 / 170 | 1% | 0.05 | 6 / 459 |
| breast | 2% | 1.45 | 7 / 459 | 0% | 0.01 | 5 / 1118 |
| lung | 1% | 0.78 | 5 / 578 | 1% | 0.02 | 9 / 1155 |
| kidney | 1% | 1.09 | 1 / 89 | 0% | 0.01 | 3 / 901 |
| adipose | 1% | 2.02 | 17 / 1204 | 0% | 0 | 0 / 0 |
| thymus | 0% | 0.35 | 3 / 653 | 1% | 0.04 | 5 / 605 |
| intestine | 1% | 0.97 | 10 / 966 | 0% | 0.01 | 1 / 527 |
| heart | 1% | 0.92 | 9 / 861 | 0% | 0 | 0 / 0 |
| stomach | 0% | 0.22 | 1 / 359 | 1% | 0.01 | 2 / 286 |
| esophagus | 0% | 0.24 | 4 / 1445 | 1% | 0.01 | 1 / 183 |
| pancreas | 0% | 0 | 0 / 328 | 1% | 0.01 | 1 / 178 |
| blood vessel | 1% | 0.55 | 7 / 1335 | 0% | 0 | 0 / 0 |
| peripheral blood | 0% | 0.56 | 4 / 929 | 0% | 0 | 0 / 0 |
| liver | 0% | 0 | 0 / 226 | 0% | 0.00 | 1 / 406 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bladder | 0% | 0 | 0 / 21 | 0% | 0 | 0 / 504 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| prostate | 0% | 0 | 0 / 245 | 0% | 0 | 0 / 502 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0001974 | Biological process | blood vessel remodeling |
| GO_0035845 | Biological process | photoreceptor cell outer segment organization |
| GO_0061159 | Biological process | establishment of bipolar cell polarity involved in cell morphogenesis |
| GO_0071482 | Biological process | cellular response to light stimulus |
| GO_0010001 | Biological process | glial cell differentiation |
| GO_0045494 | Biological process | photoreceptor cell maintenance |
| GO_0007163 | Biological process | establishment or maintenance of cell polarity |
| GO_0007267 | Biological process | cell-cell signaling |
| GO_0042462 | Biological process | eye photoreceptor cell development |
| GO_0050908 | Biological process | detection of light stimulus involved in visual perception |
| GO_0060060 | Biological process | post-embryonic retina morphogenesis in camera-type eye |
| GO_0007009 | Biological process | plasma membrane organization |
| GO_0010467 | Biological process | gene expression |
| GO_0008104 | Biological process | protein localization |
| GO_0007157 | Biological process | heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules |
| GO_0045197 | Biological process | establishment or maintenance of epithelial cell apical/basal polarity |
| GO_0010842 | Biological process | retina layer formation |
| GO_0005902 | Cellular component | microvillus |
| GO_0016324 | Cellular component | apical plasma membrane |
| GO_0035003 | Cellular component | subapical complex |
| GO_0005576 | Cellular component | extracellular region |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0001750 | Cellular component | photoreceptor outer segment |
| GO_0032991 | Cellular component | protein-containing complex |
| GO_0001917 | Cellular component | photoreceptor inner segment |
| GO_0043296 | Cellular component | apical junction complex |
| GO_0005912 | Cellular component | adherens junction |
| GO_0097386 | Cellular component | glial cell projection |
| GO_0005509 | Molecular function | calcium ion binding |
| GO_0005515 | Molecular function | protein binding |
| Gene name | CRB1 |
| Protein name | Crumbs cell polarity complex component 1 Protein crumbs homolog 1 Alternative protein CRB1 CRB1-B (Crumbs cell polarity complex component 1) |
| Synonyms | |
| Description | FUNCTION: Plays a role in photoreceptor morphogenesis in the retina (By similarity). May maintain cell polarization and adhesion (By similarity). . |
| Accessions | ENST00000638467.1 [P82279-2] ENST00000448952.1 A0A0C4DG35 A0A7D6VLH9 ENST00000535699.5 ENST00000484075.5 [P82279-2] F5H0L2 ENST00000367400.8 [P82279-1] L8E9V4 P82279 ENST00000538660.5 [P82279-5] ENST00000367399.6 [P82279-3] A0A075B6G4 ENST00000367397.1 ENST00000681519.1 |
