Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 17 studies | 27% ± 8% | |
glutamatergic neuron | 9 studies | 32% ± 17% | |
fibroblast | 8 studies | 24% ± 5% | |
GABAergic neuron | 7 studies | 35% ± 18% | |
adipocyte | 6 studies | 20% ± 5% | |
T cell | 6 studies | 23% ± 6% | |
endothelial cell of lymphatic vessel | 6 studies | 23% ± 5% | |
macrophage | 6 studies | 26% ± 5% | |
smooth muscle cell | 6 studies | 21% ± 2% | |
CD4-positive, alpha-beta T cell | 5 studies | 18% ± 3% | |
epithelial cell | 5 studies | 33% ± 20% | |
astrocyte | 5 studies | 28% ± 11% | |
cardiac muscle cell | 4 studies | 19% ± 2% | |
mast cell | 4 studies | 21% ± 5% | |
monocyte | 4 studies | 25% ± 6% | |
type I pneumocyte | 4 studies | 21% ± 5% | |
pericyte | 4 studies | 19% ± 3% | |
interneuron | 4 studies | 46% ± 20% | |
neuron | 3 studies | 23% ± 9% | |
microglial cell | 3 studies | 20% ± 5% | |
retinal pigment epithelial cell | 3 studies | 39% ± 15% | |
effector memory CD8-positive, alpha-beta T cell | 3 studies | 17% ± 2% | |
retinal rod cell | 3 studies | 26% ± 4% | |
myeloid cell | 3 studies | 28% ± 11% | |
regulatory T cell | 3 studies | 16% ± 1% | |
endothelial cell of vascular tree | 3 studies | 30% ± 8% | |
hepatocyte | 3 studies | 36% ± 17% | |
alveolar macrophage | 3 studies | 27% ± 7% | |
club cell | 3 studies | 21% ± 5% | |
type II pneumocyte | 3 studies | 20% ± 2% | |
lymphocyte | 3 studies | 29% ± 4% | |
basal cell | 3 studies | 38% ± 23% | |
granule cell | 3 studies | 24% ± 4% | |
mucus secreting cell | 3 studies | 23% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 1925.98 | 459 / 459 | 100% | 43.37 | 1117 / 1118 |
thymus | 100% | 4627.55 | 653 / 653 | 100% | 42.15 | 603 / 605 |
lung | 100% | 2675.51 | 576 / 578 | 100% | 26.58 | 1153 / 1155 |
kidney | 100% | 1962.70 | 89 / 89 | 99% | 44.79 | 896 / 901 |
bladder | 100% | 3728.19 | 21 / 21 | 99% | 32.48 | 501 / 504 |
stomach | 100% | 1779.31 | 358 / 359 | 100% | 32.20 | 285 / 286 |
intestine | 100% | 2529.12 | 966 / 966 | 99% | 37.17 | 523 / 527 |
prostate | 100% | 2829.05 | 244 / 245 | 99% | 24.92 | 498 / 502 |
uterus | 100% | 2056.63 | 170 / 170 | 98% | 24.82 | 450 / 459 |
pancreas | 98% | 951.59 | 321 / 328 | 99% | 34.87 | 176 / 178 |
skin | 100% | 2095.59 | 1802 / 1809 | 97% | 23.41 | 458 / 472 |
adrenal gland | 100% | 1273.22 | 258 / 258 | 95% | 22.57 | 219 / 230 |
esophagus | 97% | 2107.91 | 1396 / 1445 | 97% | 21.89 | 178 / 183 |
liver | 99% | 1053.83 | 224 / 226 | 93% | 20.61 | 378 / 406 |
ovary | 100% | 1765.38 | 180 / 180 | 90% | 11.37 | 389 / 430 |
brain | 92% | 1437.84 | 2440 / 2642 | 79% | 11.35 | 556 / 705 |
blood vessel | 100% | 3313.46 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 23.56 | 29 / 29 |
spleen | 100% | 1913.61 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 26.13 | 1 / 1 |
adipose | 100% | 2252.73 | 1203 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 15.56 | 43 / 45 |
heart | 84% | 921.67 | 721 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 80% | 1221.72 | 747 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 61% | 7.63 | 49 / 80 |
muscle | 42% | 268.06 | 337 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0005737 | Cellular component | cytoplasm |
GO_0003674 | Molecular function | molecular_function |
GO_0005515 | Molecular function | protein binding |
Gene name | CDR2 |
Protein name | Cerebellar degeneration-related protein 2 (Major Yo paraneoplastic antigen) (Paraneoplastic cerebellar degeneration-associated antigen) Cerebellar degeneration related protein 2 |
Synonyms | PCD17 |
Description | |
Accessions | ENST00000567010.1 ENST00000561630.1 ENST00000268383.7 H3BN65 H3BTR1 H3BU23 ENST00000567406.5 H3BUE0 ENST00000564542.5 H3BQS4 Q01850 ENST00000563573.5 |