Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 6 studies | 49% ± 21% | |
mesothelial cell | 6 studies | 48% ± 23% | |
interneuron | 5 studies | 36% ± 22% | |
GABAergic neuron | 5 studies | 42% ± 18% | |
granule cell | 4 studies | 30% ± 8% | |
Mueller cell | 4 studies | 42% ± 17% | |
endothelial cell | 3 studies | 52% ± 23% | |
neuron | 3 studies | 29% ± 8% | |
glycinergic amacrine cell | 3 studies | 27% ± 11% | |
ciliated cell | 3 studies | 25% ± 9% | |
astrocyte | 3 studies | 26% ± 8% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 7 studies | 33% ± 16% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 98% | 1850.90 | 449 / 459 | 91% | 7.73 | 1019 / 1118 |
ovary | 100% | 5635.37 | 180 / 180 | 88% | 5.07 | 380 / 430 |
thymus | 100% | 4213.45 | 653 / 653 | 87% | 7.27 | 525 / 605 |
skin | 87% | 2156.13 | 1580 / 1809 | 90% | 5.07 | 423 / 472 |
uterus | 99% | 4704.72 | 169 / 170 | 57% | 3.64 | 260 / 459 |
esophagus | 71% | 1183.22 | 1024 / 1445 | 67% | 2.71 | 123 / 183 |
lung | 58% | 443.40 | 336 / 578 | 75% | 3.15 | 870 / 1155 |
prostate | 52% | 347.28 | 128 / 245 | 80% | 2.96 | 401 / 502 |
brain | 43% | 1112.97 | 1124 / 2642 | 79% | 3.32 | 557 / 705 |
intestine | 74% | 2498.11 | 713 / 966 | 47% | 1.10 | 248 / 527 |
bladder | 81% | 748.57 | 17 / 21 | 36% | 1.05 | 179 / 504 |
stomach | 44% | 1420.67 | 158 / 359 | 59% | 1.97 | 170 / 286 |
adipose | 98% | 2925.04 | 1182 / 1204 | 0% | 0 | 0 / 0 |
kidney | 17% | 104.92 | 15 / 89 | 73% | 5.18 | 655 / 901 |
pancreas | 12% | 67.17 | 40 / 328 | 72% | 2.49 | 128 / 178 |
eye | 0% | 0 | 0 / 0 | 68% | 1.61 | 54 / 80 |
heart | 66% | 645.84 | 568 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 52% | 417.84 | 693 / 1335 | 0% | 0 | 0 / 0 |
adrenal gland | 15% | 88.76 | 38 / 258 | 34% | 1.56 | 79 / 230 |
tonsil | 0% | 0 | 0 / 0 | 49% | 1.80 | 22 / 45 |
liver | 8% | 36.53 | 17 / 226 | 31% | 0.69 | 127 / 406 |
spleen | 27% | 173.80 | 65 / 241 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 14% | 0.27 | 4 / 29 |
muscle | 4% | 20.03 | 29 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 2.39 | 2 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0002052 | Biological process | positive regulation of neuroblast proliferation |
GO_0060059 | Biological process | embryonic retina morphogenesis in camera-type eye |
GO_0007224 | Biological process | smoothened signaling pathway |
GO_0001708 | Biological process | cell fate specification |
GO_0014816 | Biological process | skeletal muscle satellite cell differentiation |
GO_0010172 | Biological process | embryonic body morphogenesis |
GO_0007155 | Biological process | cell adhesion |
GO_0001934 | Biological process | positive regulation of protein phosphorylation |
GO_0043410 | Biological process | positive regulation of MAPK cascade |
GO_0048643 | Biological process | positive regulation of skeletal muscle tissue development |
GO_0030182 | Biological process | neuron differentiation |
GO_0009952 | Biological process | anterior/posterior pattern specification |
GO_0051057 | Biological process | positive regulation of small GTPase mediated signal transduction |
GO_0002088 | Biological process | lens development in camera-type eye |
GO_0021987 | Biological process | cerebral cortex development |
GO_0007520 | Biological process | myoblast fusion |
GO_0045666 | Biological process | positive regulation of neuron differentiation |
GO_0098609 | Biological process | cell-cell adhesion |
GO_0007399 | Biological process | nervous system development |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0007405 | Biological process | neuroblast proliferation |
GO_0005886 | Cellular component | plasma membrane |
GO_0062023 | Cellular component | collagen-containing extracellular matrix |
GO_0005515 | Molecular function | protein binding |
Gene name | CDON |
Protein name | Cell adhesion molecule-related/down-regulated by oncogenes Cell adhesion associated, oncogene regulated |
Synonyms | CDO |
Description | FUNCTION: Component of a cell-surface receptor complex that mediates cell-cell interactions between muscle precursor cells. Promotes differentiation of myogenic cells (By similarity). . |
Accessions | E9PN78 ENST00000683716.1 A0A804HKV0 ENST00000684636.1 ENST00000263577.11 [Q4KMG0-2] ENST00000531738.6 [Q4KMG0-2] ENST00000684078.1 [Q4KMG0-1] ENST00000683416.1 ENST00000531738 ENST00000392693.7 [Q4KMG0-1] H0YCZ4 ENST00000531830.2 A0A804HL16 Q4KMG0 |