CCDC57 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
ciliated cell	13 studies	34% ± 12%	Explore
glutamatergic neuron	9 studies	43% ± 23%	Explore
type II pneumocyte	7 studies	23% ± 12%	Explore
GABAergic neuron	7 studies	38% ± 20%	Explore
plasmacytoid dendritic cell	7 studies	29% ± 10%	Explore
interneuron	6 studies	30% ± 12%	Explore
epithelial cell	6 studies	28% ± 8%	Explore
CD4-positive, alpha-beta T cell	5 studies	23% ± 4%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	5 studies	20% ± 6%	Explore
type I pneumocyte	5 studies	23% ± 5%	Explore
CD8-positive, alpha-beta T cell	5 studies	24% ± 10%	Explore
fibroblast	5 studies	23% ± 7%	Explore
B cell	4 studies	18% ± 4%	Explore
gamma-delta T cell	4 studies	32% ± 12%	Explore
endothelial cell	4 studies	36% ± 12%	Explore
astrocyte	4 studies	28% ± 7%	Explore
club cell	4 studies	20% ± 5%	Explore
classical monocyte	3 studies	21% ± 4%	Explore
hematopoietic precursor cell	3 studies	23% ± 1%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	3 studies	18% ± 1%	Explore
non-classical monocyte	3 studies	29% ± 6%	Explore
GABAergic interneuron	3 studies	21% ± 4%	Explore
neuron	3 studies	27% ± 5%	Explore
adipocyte	3 studies	26% ± 10%	Explore
lymphocyte	3 studies	18% ± 1%	Explore
retinal rod cell	3 studies	25% ± 4%	Explore
luminal hormone-sensing cell of mammary gland	3 studies	19% ± 3%	Explore
dendritic cell	3 studies	33% ± 4%	Explore
basal cell	3 studies	33% ± 7%	Explore
transit amplifying cell	3 studies	26% ± 13%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	11 studies	29% ± 18%	Explore
lung	4 studies	19% ± 3%	Explore
peripheral blood	3 studies	20% ± 2%	Explore
eye	3 studies	25% ± 5%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
pancreas	100%	2516.20	328 / 328	100%	8.81	178 / 178
prostate	100%	5730.48	245 / 245	100%	14.01	502 / 502
thymus	100%	7204.57	653 / 653	99%	9.36	600 / 605
breast	100%	3678.08	459 / 459	99%	11.21	1106 / 1118
uterus	100%	4450.76	170 / 170	98%	7.76	452 / 459
lung	100%	3731.82	578 / 578	98%	8.55	1137 / 1155
esophagus	100%	2034.36	1438 / 1445	99%	7.83	181 / 183
bladder	100%	3015.29	21 / 21	98%	8.01	496 / 504
intestine	100%	3067.08	966 / 966	98%	6.72	518 / 527
stomach	100%	2605.09	359 / 359	98%	6.16	279 / 286
ovary	100%	4415.12	180 / 180	97%	6.11	415 / 430
skin	100%	2330.06	1809 / 1809	96%	6.24	451 / 472
brain	93%	2420.14	2467 / 2642	98%	6.47	689 / 705
liver	100%	1736.16	225 / 226	89%	5.60	362 / 406
kidney	100%	4092.87	89 / 89	87%	8.29	783 / 901
adrenal gland	100%	3371.28	258 / 258	85%	6.12	195 / 230
lymph node	0%	0	0 / 0	100%	7.66	29 / 29
spleen	100%	2765.36	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	4.16	1 / 1
adipose	100%	2209.04	1203 / 1204	0%	0	0 / 0
blood vessel	98%	1636.59	1310 / 1335	0%	0	0 / 0
peripheral blood	96%	1861.11	890 / 929	0%	0	0 / 0
tonsil	0%	0	0 / 0	93%	5.55	42 / 45
eye	0%	0	0 / 0	91%	4.33	73 / 80
heart	85%	1001.40	735 / 861	0%	0	0 / 0
muscle	79%	933.53	635 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0