Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 3720.89 | 2642 / 2642 | 100% | 90.46 | 705 / 705 |
liver | 100% | 1953.30 | 226 / 226 | 100% | 60.97 | 406 / 406 |
ovary | 100% | 2375.86 | 180 / 180 | 100% | 67.18 | 430 / 430 |
pancreas | 100% | 1328.46 | 328 / 328 | 100% | 64.02 | 178 / 178 |
thymus | 100% | 2543.78 | 653 / 653 | 100% | 75.97 | 605 / 605 |
uterus | 100% | 2635.96 | 170 / 170 | 100% | 71.95 | 459 / 459 |
skin | 100% | 2599.13 | 1808 / 1809 | 100% | 116.71 | 471 / 472 |
adrenal gland | 100% | 2178.58 | 258 / 258 | 100% | 81.43 | 229 / 230 |
kidney | 100% | 2828.87 | 89 / 89 | 100% | 55.54 | 897 / 901 |
prostate | 100% | 3024.91 | 245 / 245 | 99% | 104.19 | 498 / 502 |
breast | 100% | 2279.89 | 459 / 459 | 99% | 64.86 | 1103 / 1118 |
bladder | 100% | 2419.95 | 21 / 21 | 98% | 60.71 | 496 / 504 |
intestine | 100% | 2125.37 | 966 / 966 | 98% | 45.42 | 518 / 527 |
lung | 100% | 2343.62 | 577 / 578 | 98% | 56.69 | 1137 / 1155 |
stomach | 100% | 1754.84 | 359 / 359 | 97% | 37.32 | 278 / 286 |
esophagus | 100% | 1733.87 | 1444 / 1445 | 97% | 29.00 | 177 / 183 |
adipose | 100% | 2009.07 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 123.51 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 96.97 | 29 / 29 |
spleen | 100% | 3206.58 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 54.74 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 64.59 | 1 / 1 |
blood vessel | 100% | 2066.14 | 1331 / 1335 | 0% | 0 | 0 / 0 |
heart | 97% | 1067.09 | 838 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 97% | 1723.82 | 902 / 929 | 0% | 0 | 0 / 0 |
muscle | 67% | 536.88 | 535 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0005975 | Biological process | carbohydrate metabolic process |
GO_0050650 | Biological process | chondroitin sulfate proteoglycan biosynthetic process |
GO_0015012 | Biological process | heparan sulfate proteoglycan biosynthetic process |
GO_0006486 | Biological process | protein glycosylation |
GO_0006024 | Biological process | glycosaminoglycan biosynthetic process |
GO_0090316 | Biological process | positive regulation of intracellular protein transport |
GO_0050651 | Biological process | dermatan sulfate proteoglycan biosynthetic process |
GO_0043085 | Biological process | positive regulation of catalytic activity |
GO_0000139 | Cellular component | Golgi membrane |
GO_0005801 | Cellular component | cis-Golgi network |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0016020 | Cellular component | membrane |
GO_0015020 | Molecular function | glucuronosyltransferase activity |
GO_0072542 | Molecular function | protein phosphatase activator activity |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0015018 | Molecular function | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
Gene name | B3GAT3 |
Protein name | Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 3) (Glucuronosyltransferase I) (GlcAT-I) (UDP-GlcUA:Gal beta-1,3-Gal-R glucuronyltransferase) (GlcUAT-I) Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase (EC 2.4.1.135) Beta-1,3-glucuronyltransferase 3 |
Synonyms | hCG_16017 |
Description | FUNCTION: Glycosaminoglycans biosynthesis . Involved in forming the linkage tetrasaccharide present in heparan sulfate and chondroitin sulfate. Transfers a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region trisaccharide Gal-beta-1,3-Gal-beta-1,4-Xyl covalently bound to a Ser residue at the glycosaminylglycan attachment site of proteoglycans. Can also play a role in the biosynthesis of l2/HNK-1 carbohydrate epitope on glycoproteins. Shows strict specificity for Gal-beta-1,3-Gal-beta-1,4-Xyl, exhibiting negligible incorporation into other galactoside substrates including Galbeta1-3Gal beta1-O-benzyl, Galbeta1-4GlcNAc and Galbeta1-4Glc. Stimulates 2-phosphoxylose phosphatase activity of PXYLP1 in presence of uridine diphosphate-glucuronic acid (UDP-GlcUA) during completion of linkage region formation . . |
Accessions | E9PQ60 E9PNA1 G3V150 ENST00000534715.1 ENST00000534026.5 [O94766-2] ENST00000532585.5 ENST00000531383.5 O94766 ENST00000265471.10 [O94766-1] Q5U676 |