Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 22 studies | 56% ± 17% | |
endothelial cell | 21 studies | 34% ± 18% | |
fibroblast | 20 studies | 36% ± 15% | |
oligodendrocyte | 17 studies | 72% ± 19% | |
oligodendrocyte precursor cell | 16 studies | 56% ± 20% | |
macrophage | 15 studies | 35% ± 20% | |
microglial cell | 14 studies | 53% ± 13% | |
glutamatergic neuron | 13 studies | 62% ± 22% | |
GABAergic neuron | 11 studies | 57% ± 21% | |
epithelial cell | 10 studies | 30% ± 12% | |
pericyte | 9 studies | 30% ± 14% | |
adipocyte | 8 studies | 42% ± 12% | |
smooth muscle cell | 8 studies | 30% ± 8% | |
endothelial cell of lymphatic vessel | 7 studies | 31% ± 12% | |
type I pneumocyte | 7 studies | 33% ± 9% | |
neuron | 7 studies | 50% ± 18% | |
amacrine cell | 7 studies | 25% ± 4% | |
interneuron | 7 studies | 61% ± 20% | |
myeloid cell | 7 studies | 23% ± 7% | |
basal cell | 7 studies | 29% ± 17% | |
retinal ganglion cell | 6 studies | 36% ± 19% | |
club cell | 6 studies | 23% ± 10% | |
retina horizontal cell | 6 studies | 40% ± 12% | |
ciliated cell | 6 studies | 27% ± 8% | |
Mueller cell | 6 studies | 58% ± 12% | |
retinal bipolar neuron | 5 studies | 28% ± 8% | |
dendritic cell | 5 studies | 21% ± 7% | |
goblet cell | 5 studies | 29% ± 21% | |
granule cell | 4 studies | 53% ± 5% | |
cardiac muscle cell | 4 studies | 28% ± 2% | |
mesothelial cell | 4 studies | 27% ± 10% | |
lymphocyte | 4 studies | 19% ± 2% | |
connective tissue cell | 4 studies | 29% ± 8% | |
type II pneumocyte | 4 studies | 18% ± 4% | |
differentiation-committed oligodendrocyte precursor | 3 studies | 63% ± 10% | |
GABAergic interneuron | 3 studies | 55% ± 10% | |
glial cell | 3 studies | 50% ± 22% | |
progenitor cell | 3 studies | 59% ± 17% | |
vein endothelial cell | 3 studies | 28% ± 16% | |
GABAergic amacrine cell | 3 studies | 40% ± 12% | |
ON-bipolar cell | 3 studies | 39% ± 15% | |
glycinergic amacrine cell | 3 studies | 27% ± 12% | |
retinal rod cell | 3 studies | 17% ± 1% | |
rod bipolar cell | 3 studies | 64% ± 11% | |
abnormal cell | 3 studies | 25% ± 5% | |
neural progenitor cell | 3 studies | 57% ± 18% | |
ependymal cell | 3 studies | 66% ± 20% | |
alveolar macrophage | 3 studies | 26% ± 8% | |
capillary endothelial cell | 3 studies | 20% ± 4% | |
monocyte | 3 studies | 23% ± 3% | |
myofibroblast cell | 3 studies | 28% ± 11% | |
transit amplifying cell | 3 studies | 39% ± 28% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 22892.16 | 2642 / 2642 | 100% | 70.36 | 703 / 705 |
lung | 100% | 7859.26 | 576 / 578 | 99% | 23.27 | 1149 / 1155 |
esophagus | 99% | 4966.74 | 1425 / 1445 | 100% | 42.22 | 183 / 183 |
breast | 100% | 8741.48 | 459 / 459 | 98% | 25.29 | 1100 / 1118 |
intestine | 100% | 6190.33 | 965 / 966 | 98% | 21.01 | 518 / 527 |
stomach | 100% | 5866.61 | 358 / 359 | 97% | 26.01 | 278 / 286 |
uterus | 100% | 10302.65 | 170 / 170 | 96% | 21.18 | 439 / 459 |
adrenal gland | 100% | 8503.39 | 258 / 258 | 95% | 21.98 | 219 / 230 |
ovary | 100% | 13993.62 | 180 / 180 | 94% | 16.21 | 406 / 430 |
bladder | 100% | 7087.95 | 21 / 21 | 94% | 17.41 | 473 / 504 |
kidney | 99% | 3716.93 | 88 / 89 | 95% | 16.64 | 855 / 901 |
thymus | 100% | 6378.16 | 651 / 653 | 93% | 13.49 | 560 / 605 |
prostate | 100% | 5504.00 | 244 / 245 | 92% | 13.36 | 460 / 502 |
skin | 97% | 6074.78 | 1752 / 1809 | 94% | 21.79 | 442 / 472 |
pancreas | 82% | 2266.43 | 268 / 328 | 99% | 23.87 | 176 / 178 |
liver | 62% | 1701.73 | 140 / 226 | 75% | 9.10 | 305 / 406 |
adipose | 100% | 9672.48 | 1204 / 1204 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 8.11 | 1 / 1 |
blood vessel | 100% | 7788.84 | 1331 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 4612.94 | 794 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 5483.93 | 842 / 861 | 0% | 0 | 0 / 0 |
spleen | 92% | 2793.47 | 222 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 91% | 20.30 | 41 / 45 |
eye | 0% | 0 | 0 / 0 | 63% | 6.27 | 50 / 80 |
lymph node | 0% | 0 | 0 / 0 | 52% | 4.81 | 15 / 29 |
peripheral blood | 16% | 550.01 | 153 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007165 | Biological process | signal transduction |
GO_0051056 | Biological process | regulation of small GTPase mediated signal transduction |
GO_0072384 | Biological process | organelle transport along microtubule |
GO_0051683 | Biological process | establishment of Golgi localization |
GO_0007030 | Biological process | Golgi organization |
GO_0051684 | Biological process | maintenance of Golgi location |
GO_0051645 | Biological process | Golgi localization |
GO_0030054 | Cellular component | cell junction |
GO_0000139 | Cellular component | Golgi membrane |
GO_0015629 | Cellular component | actin cytoskeleton |
GO_0005829 | Cellular component | cytosol |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0070161 | Cellular component | anchoring junction |
GO_0005886 | Cellular component | plasma membrane |
GO_0030659 | Cellular component | cytoplasmic vesicle membrane |
GO_0005515 | Molecular function | protein binding |
GO_0005096 | Molecular function | GTPase activator activity |
Gene name | ARHGAP21 |
Protein name | Rho GTPase activating protein 21 ARHGAP21 protein ARHGAP21 Alternative protein ARHGAP21 Rho GTPase-activating protein 21 (Rho GTPase-activating protein 10) (Rho-type GTPase-activating protein 21) |
Synonyms | ARHGAP10 KIAA1424 |
Description | FUNCTION: Functions as a GTPase-activating protein (GAP) for RHOA and CDC42. Downstream partner of ARF1 which may control Golgi apparatus structure and function. Also required for CTNNA1 recruitment to adherens junctions. . |
Accessions | A0A2X0SF83 Q5JSD8 ENST00000612832.4 ENST00000638156.1 J3JSM9 E7ESW5 ENST00000376410.7 Q5T5U3 A0A1B0GV73 ENST00000636789.1 A0A805TBS0 ENST00000446003.5 H0Y5T2 ENST00000418325.1 ENST00000396432.7 [Q5T5U3-1] ENST00000680286.1 A0A7P0TAS2 A0A087WW76 A0A1B0GTZ9 ENST00000418033.5 L8EB25 ENST00000416305.1 H0Y468 |