ARFGAP3 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
pericyte	18 studies	23% ± 8%	Explore
fibroblast	17 studies	24% ± 7%	Explore
macrophage	14 studies	22% ± 7%	Explore
natural killer cell	14 studies	21% ± 3%	Explore
smooth muscle cell	13 studies	21% ± 5%	Explore
plasma cell	13 studies	33% ± 11%	Explore
plasmacytoid dendritic cell	12 studies	26% ± 7%	Explore
endothelial cell	11 studies	29% ± 7%	Explore
CD16-positive, CD56-dim natural killer cell, human	9 studies	20% ± 4%	Explore
endothelial cell of lymphatic vessel	8 studies	24% ± 9%	Explore
CD16-negative, CD56-bright natural killer cell, human	8 studies	24% ± 5%	Explore
classical monocyte	7 studies	32% ± 12%	Explore
astrocyte	7 studies	27% ± 4%	Explore
non-classical monocyte	6 studies	26% ± 8%	Explore
conventional dendritic cell	6 studies	29% ± 8%	Explore
mature NK T cell	6 studies	16% ± 1%	Explore
mucosal invariant T cell	6 studies	18% ± 2%	Explore
myofibroblast cell	6 studies	18% ± 3%	Explore
epithelial cell	6 studies	42% ± 18%	Explore
ciliated cell	6 studies	30% ± 9%	Explore
dendritic cell	5 studies	30% ± 13%	Explore
mast cell	5 studies	22% ± 6%	Explore
monocyte	5 studies	21% ± 4%	Explore
plasmablast	5 studies	43% ± 18%	Explore
respiratory goblet cell	5 studies	24% ± 11%	Explore
leukocyte	5 studies	20% ± 2%	Explore
microglial cell	5 studies	19% ± 4%	Explore
myeloid cell	5 studies	28% ± 9%	Explore
basal cell	5 studies	27% ± 10%	Explore
oligodendrocyte	5 studies	22% ± 4%	Explore
goblet cell	5 studies	35% ± 20%	Explore
gamma-delta T cell	5 studies	22% ± 7%	Explore
pancreatic A cell	4 studies	31% ± 13%	Explore
CD8-positive, alpha-beta T cell	4 studies	19% ± 3%	Explore
effector memory CD8-positive, alpha-beta T cell	4 studies	20% ± 2%	Explore
club cell	4 studies	26% ± 2%	Explore
secretory cell	4 studies	25% ± 7%	Explore
CD8-positive, alpha-beta memory T cell	4 studies	18% ± 2%	Explore
IgA plasma cell	4 studies	21% ± 5%	Explore
endothelial cell of artery	4 studies	17% ± 1%	Explore
luminal cell of prostate epithelium	4 studies	33% ± 7%	Explore
type II pneumocyte	4 studies	22% ± 8%	Explore
glutamatergic neuron	4 studies	41% ± 17%	Explore
oligodendrocyte precursor cell	4 studies	26% ± 7%	Explore
connective tissue cell	4 studies	28% ± 8%	Explore
type B pancreatic cell	3 studies	38% ± 15%	Explore
mononuclear phagocyte	3 studies	21% ± 1%	Explore
innate lymphoid cell	3 studies	24% ± 7%	Explore
mucus secreting cell	3 studies	24% ± 7%	Explore
lymphocyte	3 studies	24% ± 6%	Explore
IgG plasma cell	3 studies	19% ± 1%	Explore
muscle cell	3 studies	29% ± 8%	Explore
GABAergic neuron	3 studies	43% ± 8%	Explore
enteroendocrine cell	3 studies	23% ± 10%	Explore
endothelial cell of vascular tree	3 studies	28% ± 7%	Explore
neuron	3 studies	26% ± 8%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
lung	8 studies	23% ± 9%	Explore
brain	5 studies	33% ± 12%	Explore
peripheral blood	4 studies	24% ± 3%	Explore
pancreas	3 studies	38% ± 13%	Explore
prostate	3 studies	22% ± 2%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	2564.34	1445 / 1445	100%	51.63	183 / 183
lung	100%	4188.79	578 / 578	100%	64.45	1155 / 1155
prostate	100%	6697.05	245 / 245	100%	203.63	502 / 502
pancreas	100%	6096.42	328 / 328	99%	71.91	177 / 178
uterus	100%	3450.74	170 / 170	99%	66.32	456 / 459
stomach	100%	3830.07	359 / 359	99%	44.29	284 / 286
intestine	100%	3069.02	966 / 966	99%	47.24	523 / 527
thymus	100%	5176.65	653 / 653	99%	65.30	600 / 605
breast	100%	3790.57	459 / 459	99%	57.29	1108 / 1118
kidney	100%	4218.69	89 / 89	99%	61.21	892 / 901
skin	100%	3037.45	1809 / 1809	99%	60.30	466 / 472
brain	98%	1711.77	2588 / 2642	100%	47.53	705 / 705
liver	100%	3408.66	226 / 226	98%	42.49	397 / 406
bladder	100%	3505.48	21 / 21	97%	44.12	491 / 504
adrenal gland	100%	10358.05	258 / 258	97%	51.75	224 / 230
ovary	100%	2579.39	180 / 180	95%	26.41	408 / 430
adipose	100%	3635.44	1204 / 1204	0%	0	0 / 0
blood vessel	100%	5119.57	1335 / 1335	0%	0	0 / 0
spleen	100%	3138.20	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	58.68	45 / 45
ureter	0%	0	0 / 0	100%	22.16	1 / 1
muscle	100%	2237.07	799 / 803	0%	0	0 / 0
lymph node	0%	0	0 / 0	97%	42.09	28 / 29
peripheral blood	96%	2715.82	896 / 929	0%	0	0 / 0
heart	95%	1875.36	816 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	89%	44.52	71 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

III. Associated gene sets

GO_0016192	Biological process	vesicle-mediated transport
GO_0006886	Biological process	intracellular protein transport
GO_0048205	Biological process	COPI coating of Golgi vesicle
GO_0009306	Biological process	protein secretion
GO_0000139	Cellular component	Golgi membrane
GO_0005829	Cellular component	cytosol
GO_0005794	Cellular component	Golgi apparatus
GO_0016020	Cellular component	membrane
GO_0005515	Molecular function	protein binding
GO_0046872	Molecular function	metal ion binding
GO_0005096	Molecular function	GTPase activator activity

IV. Literature review

[source]

Gene name	ARFGAP3
Protein name	ADP-ribosylation factor GTPase-activating protein 3 (ARF GAP 3) ADP-ribosylation factor GTPase-activating protein 3 ADP ribosylation factor GTPase activating protein 3
Synonyms	ARFGAP1
Description	FUNCTION: GTPase-activating protein (GAP) for ADP ribosylation factor 1 (ARF1). Hydrolysis of ARF1-bound GTP may lead to dissociation of coatomer from Golgi-derived membranes to allow fusion with target membranes. . FUNCTION: GTPase-activating protein (GAP) for ADP ribosylation factor 1 (ARF1). Hydrolysis of ARF1-bound GTP may lead to dissociation of coatomer from Golgi-derived membranes to allow fusion with target membranes. . FUNCTION: GTPase-activating protein (GAP) for ADP ribosylation factor 1 (ARF1). Hydrolysis of ARF1-bound GTP may lead to dissociation of coatomer from Golgi-derived membranes to allow fusion with target membranes. .
Accessions	ENST00000263245.10 [Q9NP61-1] B0QYV8 ENST00000453516.5 ENST00000435208.1 ENST00000454099.5 ENST00000437119.6 [Q9NP61-2] H0Y6A0 Q9NP61 B0QYV9

ARFGAP3 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review