Name | Number of supported studies | Average coverage | |
---|---|---|---|
smooth muscle cell | 33 studies | 38% ± 16% | |
endothelial cell | 31 studies | 36% ± 17% | |
pericyte | 30 studies | 33% ± 14% | |
fibroblast | 28 studies | 37% ± 16% | |
basal cell | 19 studies | 41% ± 21% | |
astrocyte | 16 studies | 45% ± 18% | |
oligodendrocyte | 14 studies | 62% ± 20% | |
myofibroblast cell | 13 studies | 37% ± 19% | |
ciliated cell | 12 studies | 39% ± 21% | |
glutamatergic neuron | 11 studies | 49% ± 22% | |
oligodendrocyte precursor cell | 11 studies | 40% ± 18% | |
connective tissue cell | 11 studies | 28% ± 10% | |
GABAergic neuron | 10 studies | 44% ± 23% | |
neuron | 9 studies | 47% ± 24% | |
adipocyte | 9 studies | 33% ± 10% | |
microglial cell | 9 studies | 31% ± 13% | |
endothelial cell of artery | 8 studies | 33% ± 12% | |
epithelial cell | 8 studies | 43% ± 19% | |
mesothelial cell | 8 studies | 50% ± 15% | |
endothelial cell of lymphatic vessel | 8 studies | 40% ± 12% | |
macrophage | 8 studies | 29% ± 9% | |
club cell | 7 studies | 41% ± 16% | |
type I pneumocyte | 7 studies | 55% ± 17% | |
cardiac muscle cell | 6 studies | 72% ± 19% | |
vein endothelial cell | 6 studies | 31% ± 20% | |
Mueller cell | 6 studies | 48% ± 21% | |
endothelial cell of vascular tree | 6 studies | 37% ± 15% | |
type II pneumocyte | 6 studies | 43% ± 15% | |
respiratory goblet cell | 5 studies | 37% ± 14% | |
hepatocyte | 5 studies | 69% ± 22% | |
interneuron | 5 studies | 59% ± 20% | |
secretory cell | 4 studies | 23% ± 9% | |
cholangiocyte | 4 studies | 69% ± 19% | |
podocyte | 4 studies | 44% ± 21% | |
retinal pigment epithelial cell | 4 studies | 60% ± 27% | |
amacrine cell | 4 studies | 27% ± 6% | |
retina horizontal cell | 4 studies | 29% ± 8% | |
retinal ganglion cell | 4 studies | 39% ± 23% | |
myeloid cell | 4 studies | 28% ± 8% | |
muscle cell | 4 studies | 52% ± 28% | |
capillary endothelial cell | 4 studies | 27% ± 4% | |
melanocyte | 4 studies | 47% ± 15% | |
keratinocyte | 4 studies | 36% ± 14% | |
myoepithelial cell | 4 studies | 45% ± 26% | |
hepatic stellate cell | 3 studies | 52% ± 23% | |
glomerular endothelial cell | 3 studies | 24% ± 1% | |
neural crest cell | 3 studies | 16% ± 0% | |
endocardial cell | 3 studies | 34% ± 13% | |
glial cell | 3 studies | 48% ± 1% | |
lymphocyte | 3 studies | 24% ± 7% | |
glycinergic amacrine cell | 3 studies | 21% ± 4% | |
retinal cone cell | 3 studies | 23% ± 3% | |
retinal rod cell | 3 studies | 20% ± 3% | |
ependymal cell | 3 studies | 77% ± 8% | |
adventitial cell | 3 studies | 33% ± 11% | |
alveolar macrophage | 3 studies | 26% ± 6% | |
chondrocyte | 3 studies | 53% ± 16% | |
monocyte | 3 studies | 29% ± 5% | |
Schwann cell | 3 studies | 32% ± 10% | |
goblet cell | 3 studies | 43% ± 32% | |
granule cell | 3 studies | 58% ± 16% | |
mast cell | 3 studies | 24% ± 10% | |
kidney distal convoluted tubule epithelial cell | 3 studies | 39% ± 17% | |
kidney loop of Henle epithelial cell | 3 studies | 37% ± 15% | |
dendritic cell | 3 studies | 18% ± 2% | |
mucus secreting cell | 3 studies | 40% ± 8% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 13 studies | 53% ± 19% | |
lung | 9 studies | 33% ± 9% | |
heart | 6 studies | 42% ± 18% | |
eye | 5 studies | 36% ± 20% | |
liver | 3 studies | 51% ± 18% | |
esophagus | 3 studies | 40% ± 13% | |
intestine | 3 studies | 21% ± 6% | |
adipose | 3 studies | 33% ± 6% | |
skin | 3 studies | 30% ± 10% | |
kidney | 3 studies | 49% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
pancreas | 100% | 3139.02 | 328 / 328 | 100% | 15.94 | 178 / 178 |
liver | 100% | 4697.28 | 226 / 226 | 99% | 9.76 | 403 / 406 |
uterus | 100% | 7234.94 | 170 / 170 | 99% | 25.45 | 454 / 459 |
esophagus | 100% | 6150.04 | 1445 / 1445 | 99% | 15.83 | 181 / 183 |
lung | 99% | 2800.86 | 575 / 578 | 99% | 16.48 | 1143 / 1155 |
ovary | 100% | 3210.26 | 180 / 180 | 98% | 13.32 | 421 / 430 |
prostate | 100% | 6421.21 | 245 / 245 | 97% | 9.54 | 487 / 502 |
stomach | 100% | 2859.79 | 358 / 359 | 97% | 8.75 | 278 / 286 |
thymus | 100% | 3202.04 | 653 / 653 | 97% | 14.11 | 586 / 605 |
intestine | 100% | 4068.78 | 966 / 966 | 97% | 8.87 | 510 / 527 |
bladder | 100% | 5180.38 | 21 / 21 | 96% | 11.41 | 486 / 504 |
kidney | 100% | 3481.34 | 89 / 89 | 94% | 9.66 | 851 / 901 |
breast | 98% | 1813.33 | 452 / 459 | 87% | 6.33 | 969 / 1118 |
adrenal gland | 100% | 2349.82 | 258 / 258 | 82% | 6.97 | 188 / 230 |
brain | 89% | 1449.95 | 2345 / 2642 | 78% | 5.13 | 551 / 705 |
skin | 98% | 3062.33 | 1773 / 1809 | 63% | 4.65 | 296 / 472 |
tonsil | 0% | 0 | 0 / 0 | 100% | 32.41 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 13.83 | 1 / 1 |
blood vessel | 100% | 7576.33 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 100% | 4885.60 | 857 / 861 | 0% | 0 | 0 / 0 |
muscle | 99% | 3299.27 | 796 / 803 | 0% | 0 | 0 / 0 |
spleen | 99% | 1769.36 | 238 / 241 | 0% | 0 | 0 / 0 |
adipose | 98% | 2078.84 | 1185 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 28% | 0.96 | 8 / 29 |
eye | 0% | 0 | 0 / 0 | 26% | 0.94 | 21 / 80 |
peripheral blood | 5% | 37.85 | 42 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006508 | Biological process | proteolysis |
GO_0005730 | Cellular component | nucleolus |
GO_0005829 | Cellular component | cytosol |
GO_0070006 | Molecular function | metalloaminopeptidase activity |
GO_0008270 | Molecular function | zinc ion binding |
Gene name | AOPEP |
Protein name | Aminopeptidase O (putative) Aminopeptidase O (AP-O) (EC 3.4.11.-) Chromosome 9 open reading frame 3, isoform CRA_c (cDNA FLJ52730, highly similar to Aminopeptidase O) |
Synonyms | hCG_2003660 ONPEP C9orf3 |
Description | FUNCTION: Aminopeptidase which catalyzes the hydrolysis of amino acid residues from the N-terminus of peptide or protein substrates. . |
Accessions | H0Y7A8 B4DQU3 Q8N6M6 ENST00000277198.6 [Q8N6M6-3] X6RBX4 ENST00000451893.5 ENST00000427193.1 ENST00000297979.9 [Q8N6M6-2] ENST00000375315.8 [Q8N6M6-1] |