Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| smooth muscle cell | 33 studies | 38% ± 16% | |
| endothelial cell | 31 studies | 36% ± 17% | |
| pericyte | 30 studies | 33% ± 14% | |
| fibroblast | 28 studies | 37% ± 16% | |
| basal cell | 19 studies | 41% ± 21% | |
| astrocyte | 16 studies | 45% ± 18% | |
| oligodendrocyte | 14 studies | 62% ± 20% | |
| myofibroblast cell | 13 studies | 37% ± 19% | |
| ciliated cell | 12 studies | 39% ± 21% | |
| glutamatergic neuron | 11 studies | 49% ± 22% | |
| oligodendrocyte precursor cell | 11 studies | 40% ± 18% | |
| connective tissue cell | 11 studies | 28% ± 10% | |
| GABAergic neuron | 10 studies | 44% ± 23% | |
| neuron | 9 studies | 47% ± 24% | |
| adipocyte | 9 studies | 33% ± 10% | |
| microglial cell | 9 studies | 31% ± 13% | |
| endothelial cell of artery | 8 studies | 33% ± 12% | |
| epithelial cell | 8 studies | 43% ± 19% | |
| mesothelial cell | 8 studies | 50% ± 15% | |
| endothelial cell of lymphatic vessel | 8 studies | 40% ± 12% | |
| macrophage | 8 studies | 29% ± 9% | |
| club cell | 7 studies | 41% ± 16% | |
| type I pneumocyte | 7 studies | 55% ± 17% | |
| cardiac muscle cell | 6 studies | 72% ± 19% | |
| vein endothelial cell | 6 studies | 31% ± 20% | |
| Mueller cell | 6 studies | 48% ± 21% | |
| endothelial cell of vascular tree | 6 studies | 37% ± 15% | |
| type II pneumocyte | 6 studies | 43% ± 15% | |
| respiratory goblet cell | 5 studies | 37% ± 14% | |
| hepatocyte | 5 studies | 69% ± 22% | |
| interneuron | 5 studies | 59% ± 20% | |
| secretory cell | 4 studies | 23% ± 9% | |
| cholangiocyte | 4 studies | 69% ± 19% | |
| podocyte | 4 studies | 44% ± 21% | |
| retinal pigment epithelial cell | 4 studies | 60% ± 27% | |
| amacrine cell | 4 studies | 27% ± 6% | |
| retina horizontal cell | 4 studies | 29% ± 8% | |
| retinal ganglion cell | 4 studies | 39% ± 23% | |
| myeloid cell | 4 studies | 28% ± 8% | |
| muscle cell | 4 studies | 52% ± 28% | |
| capillary endothelial cell | 4 studies | 27% ± 4% | |
| melanocyte | 4 studies | 47% ± 15% | |
| keratinocyte | 4 studies | 36% ± 14% | |
| myoepithelial cell | 4 studies | 45% ± 26% | |
| hepatic stellate cell | 3 studies | 52% ± 23% | |
| glomerular endothelial cell | 3 studies | 24% ± 1% | |
| neural crest cell | 3 studies | 16% ± 0% | |
| endocardial cell | 3 studies | 34% ± 13% | |
| glial cell | 3 studies | 48% ± 1% | |
| lymphocyte | 3 studies | 24% ± 7% | |
| glycinergic amacrine cell | 3 studies | 21% ± 4% | |
| retinal cone cell | 3 studies | 23% ± 3% | |
| retinal rod cell | 3 studies | 20% ± 3% | |
| ependymal cell | 3 studies | 77% ± 8% | |
| adventitial cell | 3 studies | 33% ± 11% | |
| alveolar macrophage | 3 studies | 26% ± 6% | |
| chondrocyte | 3 studies | 53% ± 16% | |
| monocyte | 3 studies | 29% ± 5% | |
| Schwann cell | 3 studies | 32% ± 10% | |
| goblet cell | 3 studies | 43% ± 32% | |
| granule cell | 3 studies | 58% ± 16% | |
| mast cell | 3 studies | 24% ± 10% | |
| kidney distal convoluted tubule epithelial cell | 3 studies | 39% ± 17% | |
| kidney loop of Henle epithelial cell | 3 studies | 37% ± 15% | |
| dendritic cell | 3 studies | 18% ± 2% | |
| mucus secreting cell | 3 studies | 40% ± 8% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 13 studies | 53% ± 19% | |
| lung | 9 studies | 33% ± 9% | |
| heart | 6 studies | 42% ± 18% | |
| eye | 5 studies | 36% ± 20% | |
| liver | 3 studies | 51% ± 18% | |
| esophagus | 3 studies | 40% ± 13% | |
| intestine | 3 studies | 21% ± 6% | |
| adipose | 3 studies | 33% ± 6% | |
| skin | 3 studies | 30% ± 10% | |
| kidney | 3 studies | 49% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| pancreas | 100% | 3139.02 | 328 / 328 | 100% | 15.94 | 178 / 178 |
| liver | 100% | 4697.28 | 226 / 226 | 99% | 9.76 | 403 / 406 |
| uterus | 100% | 7234.94 | 170 / 170 | 99% | 25.45 | 454 / 459 |
| esophagus | 100% | 6150.04 | 1445 / 1445 | 99% | 15.83 | 181 / 183 |
| lung | 99% | 2800.86 | 575 / 578 | 99% | 16.48 | 1143 / 1155 |
| ovary | 100% | 3210.26 | 180 / 180 | 98% | 13.32 | 421 / 430 |
| prostate | 100% | 6421.21 | 245 / 245 | 97% | 9.54 | 487 / 502 |
| stomach | 100% | 2859.79 | 358 / 359 | 97% | 8.75 | 278 / 286 |
| thymus | 100% | 3202.04 | 653 / 653 | 97% | 14.11 | 586 / 605 |
| intestine | 100% | 4068.78 | 966 / 966 | 97% | 8.87 | 510 / 527 |
| bladder | 100% | 5180.38 | 21 / 21 | 96% | 11.41 | 486 / 504 |
| kidney | 100% | 3481.34 | 89 / 89 | 94% | 9.66 | 851 / 901 |
| breast | 98% | 1813.33 | 452 / 459 | 87% | 6.33 | 969 / 1118 |
| adrenal gland | 100% | 2349.82 | 258 / 258 | 82% | 6.97 | 188 / 230 |
| brain | 89% | 1449.95 | 2345 / 2642 | 78% | 5.13 | 551 / 705 |
| skin | 98% | 3062.33 | 1773 / 1809 | 63% | 4.65 | 296 / 472 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 32.41 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 13.83 | 1 / 1 |
| blood vessel | 100% | 7576.33 | 1334 / 1335 | 0% | 0 | 0 / 0 |
| heart | 100% | 4885.60 | 857 / 861 | 0% | 0 | 0 / 0 |
| muscle | 99% | 3299.27 | 796 / 803 | 0% | 0 | 0 / 0 |
| spleen | 99% | 1769.36 | 238 / 241 | 0% | 0 | 0 / 0 |
| adipose | 98% | 2078.84 | 1185 / 1204 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 28% | 0.96 | 8 / 29 |
| eye | 0% | 0 | 0 / 0 | 26% | 0.94 | 21 / 80 |
| peripheral blood | 5% | 37.85 | 42 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0006508 | Biological process | proteolysis |
| GO_0005730 | Cellular component | nucleolus |
| GO_0005829 | Cellular component | cytosol |
| GO_0070006 | Molecular function | metalloaminopeptidase activity |
| GO_0008270 | Molecular function | zinc ion binding |
| Gene name | AOPEP |
| Protein name | Aminopeptidase O (putative) Aminopeptidase O (AP-O) (EC 3.4.11.-) Chromosome 9 open reading frame 3, isoform CRA_c (cDNA FLJ52730, highly similar to Aminopeptidase O) |
| Synonyms | hCG_2003660 ONPEP C9orf3 |
| Description | FUNCTION: Aminopeptidase which catalyzes the hydrolysis of amino acid residues from the N-terminus of peptide or protein substrates. . |
| Accessions | H0Y7A8 B4DQU3 Q8N6M6 ENST00000277198.6 [Q8N6M6-3] X6RBX4 ENST00000451893.5 ENST00000427193.1 ENST00000297979.9 [Q8N6M6-2] ENST00000375315.8 [Q8N6M6-1] |