Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 21 studies | 70% ± 25% | |
goblet cell | 11 studies | 53% ± 21% | |
type I pneumocyte | 10 studies | 36% ± 17% | |
epithelial cell | 10 studies | 54% ± 22% | |
type II pneumocyte | 9 studies | 44% ± 15% | |
enterocyte | 7 studies | 57% ± 22% | |
club cell | 6 studies | 52% ± 26% | |
secretory cell | 5 studies | 27% ± 15% | |
progenitor cell | 4 studies | 73% ± 1% | |
transit amplifying cell | 4 studies | 49% ± 23% | |
luminal hormone-sensing cell of mammary gland | 4 studies | 49% ± 9% | |
basal cell | 4 studies | 26% ± 7% | |
deuterosomal cell | 3 studies | 43% ± 8% | |
intestinal crypt stem cell | 3 studies | 61% ± 4% | |
mucus secreting cell | 3 studies | 51% ± 18% | |
respiratory goblet cell | 3 studies | 41% ± 35% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 98% | 1368.80 | 568 / 578 | 54% | 114.56 | 619 / 1155 |
breast | 50% | 367.86 | 231 / 459 | 73% | 376.33 | 821 / 1118 |
intestine | 54% | 1466.92 | 520 / 966 | 68% | 118.77 | 360 / 527 |
stomach | 59% | 329.93 | 213 / 359 | 57% | 95.53 | 164 / 286 |
pancreas | 27% | 41.52 | 88 / 328 | 67% | 107.36 | 120 / 178 |
bladder | 24% | 105.95 | 5 / 21 | 23% | 30.19 | 114 / 504 |
esophagus | 3% | 8.38 | 42 / 1445 | 37% | 83.81 | 67 / 183 |
prostate | 14% | 30.97 | 35 / 245 | 22% | 22.61 | 108 / 502 |
thymus | 30% | 70.93 | 193 / 653 | 0% | 0.13 | 2 / 605 |
uterus | 6% | 64.14 | 10 / 170 | 17% | 32.55 | 76 / 459 |
kidney | 16% | 37.70 | 14 / 89 | 2% | 1.62 | 21 / 901 |
ovary | 2% | 3.41 | 3 / 180 | 11% | 8.14 | 49 / 430 |
skin | 5% | 8.91 | 90 / 1809 | 0% | 0.10 | 1 / 472 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.92 | 1 / 45 |
brain | 1% | 1.56 | 28 / 2642 | 0% | 0.11 | 2 / 705 |
liver | 0% | 0 | 0 / 226 | 0% | 0.83 | 2 / 406 |
adrenal gland | 0% | 0.47 | 1 / 258 | 0% | 0 | 0 / 230 |
blood vessel | 0% | 0.14 | 2 / 1335 | 0% | 0 | 0 / 0 |
heart | 0% | 0.13 | 1 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 1.51 | 1 / 929 | 0% | 0 | 0 / 0 |
adipose | 0% | 0.09 | 1 / 1204 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0008150 | Biological process | biological_process |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0002162 | Molecular function | dystroglycan binding |
GO_0005515 | Molecular function | protein binding |
Gene name | AGR3 |
Protein name | Anterior gradient protein 3 (AG-3) (AG3) (hAG-3) (Anterior gradient 3 homolog) (Breast cancer membrane protein 11) (Protein disulfide isomerase family A, member 18) Anterior gradient 3, protein disulphide isomerase family member |
Synonyms | PDIA18 UNQ642/PRO1272 BCMP11 |
Description | FUNCTION: Required for calcium-mediated regulation of ciliary beat frequency and mucociliary clearance in the airway. Might be involved in the regulation of intracellular calcium in tracheal epithelial cells. . |
Accessions | ENST00000402239.7 H7C040 B5MC62 ENST00000414935.1 ENST00000310398.7 Q8TD06 |