Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 14 studies | 29% ± 11% | |
ciliated cell | 11 studies | 25% ± 9% | |
B cell | 10 studies | 20% ± 4% | |
endothelial cell | 10 studies | 27% ± 10% | |
adipocyte | 9 studies | 29% ± 17% | |
natural killer cell | 8 studies | 17% ± 2% | |
memory B cell | 8 studies | 19% ± 4% | |
plasma cell | 7 studies | 29% ± 4% | |
basal cell | 7 studies | 24% ± 10% | |
epithelial cell of proximal tubule | 7 studies | 27% ± 6% | |
glutamatergic neuron | 7 studies | 36% ± 21% | |
epithelial cell | 7 studies | 41% ± 16% | |
GABAergic neuron | 7 studies | 33% ± 18% | |
enterocyte | 6 studies | 32% ± 6% | |
naive B cell | 6 studies | 18% ± 4% | |
macrophage | 6 studies | 22% ± 4% | |
plasmablast | 5 studies | 42% ± 22% | |
CD16-positive, CD56-dim natural killer cell, human | 5 studies | 19% ± 3% | |
non-classical monocyte | 5 studies | 29% ± 12% | |
kidney loop of Henle epithelial cell | 5 studies | 21% ± 4% | |
abnormal cell | 5 studies | 20% ± 3% | |
smooth muscle cell | 5 studies | 18% ± 1% | |
retinal rod cell | 5 studies | 22% ± 4% | |
cardiac muscle cell | 5 studies | 49% ± 8% | |
goblet cell | 5 studies | 27% ± 11% | |
oligodendrocyte | 5 studies | 23% ± 5% | |
classical monocyte | 4 studies | 26% ± 9% | |
hematopoietic precursor cell | 4 studies | 20% ± 5% | |
renal alpha-intercalated cell | 4 studies | 31% ± 10% | |
neuron | 4 studies | 33% ± 9% | |
retinal ganglion cell | 4 studies | 50% ± 24% | |
retinal cone cell | 4 studies | 32% ± 16% | |
fibroblast | 4 studies | 24% ± 7% | |
pericyte | 4 studies | 18% ± 2% | |
interneuron | 4 studies | 34% ± 18% | |
ionocyte | 3 studies | 29% ± 6% | |
secretory cell | 3 studies | 19% ± 4% | |
CD16-negative, CD56-bright natural killer cell, human | 3 studies | 18% ± 2% | |
conventional dendritic cell | 3 studies | 38% ± 13% | |
microglial cell | 3 studies | 19% ± 2% | |
endothelial cell of lymphatic vessel | 3 studies | 18% ± 4% | |
retinal pigment epithelial cell | 3 studies | 34% ± 12% | |
muscle cell | 3 studies | 29% ± 11% | |
CD8-positive, alpha-beta T cell | 3 studies | 19% ± 2% | |
dendritic cell | 3 studies | 42% ± 15% | |
plasmacytoid dendritic cell | 3 studies | 24% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 8393.22 | 2630 / 2642 | 100% | 48.70 | 702 / 705 |
stomach | 99% | 6053.97 | 357 / 359 | 100% | 28.96 | 285 / 286 |
kidney | 100% | 7250.81 | 89 / 89 | 99% | 43.67 | 888 / 901 |
intestine | 99% | 5992.53 | 961 / 966 | 99% | 29.00 | 521 / 527 |
skin | 99% | 3384.53 | 1787 / 1809 | 99% | 40.11 | 469 / 472 |
esophagus | 98% | 5183.07 | 1418 / 1445 | 100% | 26.47 | 183 / 183 |
breast | 100% | 3948.58 | 458 / 459 | 98% | 23.73 | 1096 / 1118 |
lung | 98% | 3129.37 | 566 / 578 | 99% | 23.70 | 1147 / 1155 |
bladder | 100% | 3701.29 | 21 / 21 | 97% | 20.83 | 489 / 504 |
thymus | 99% | 3936.16 | 649 / 653 | 97% | 23.42 | 586 / 605 |
prostate | 97% | 2757.02 | 238 / 245 | 98% | 25.38 | 490 / 502 |
uterus | 98% | 2875.95 | 167 / 170 | 96% | 19.82 | 439 / 459 |
adrenal gland | 100% | 5849.47 | 258 / 258 | 90% | 20.38 | 206 / 230 |
ovary | 91% | 2159.24 | 163 / 180 | 98% | 19.16 | 421 / 430 |
pancreas | 89% | 2050.28 | 292 / 328 | 99% | 17.48 | 176 / 178 |
liver | 76% | 2234.81 | 172 / 226 | 93% | 18.95 | 379 / 406 |
muscle | 100% | 24161.39 | 803 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 27.61 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.21 | 1 / 1 |
adipose | 100% | 4543.81 | 1200 / 1204 | 0% | 0 | 0 / 0 |
spleen | 99% | 2862.97 | 239 / 241 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 39.21 | 79 / 80 |
blood vessel | 99% | 3231.61 | 1316 / 1335 | 0% | 0 | 0 / 0 |
heart | 94% | 21060.91 | 806 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 93% | 21.40 | 27 / 29 |
peripheral blood | 58% | 2601.45 | 542 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0035900 | Biological process | response to isolation stress |
GO_0006091 | Biological process | generation of precursor metabolites and energy |
GO_0001889 | Biological process | liver development |
GO_0006101 | Biological process | citrate metabolic process |
GO_0006099 | Biological process | tricarboxylic acid cycle |
GO_0006102 | Biological process | isocitrate metabolic process |
GO_0005829 | Cellular component | cytosol |
GO_0005759 | Cellular component | mitochondrial matrix |
GO_0005739 | Cellular component | mitochondrion |
GO_0003994 | Molecular function | aconitate hydratase activity |
GO_0051539 | Molecular function | 4 iron, 4 sulfur cluster binding |
GO_0005506 | Molecular function | iron ion binding |
GO_0051538 | Molecular function | 3 iron, 4 sulfur cluster binding |
Gene name | ACO2 |
Protein name | Aconitate hydratase, mitochondrial (Aconitase) (EC 4.2.1.3) (Citrate hydro-lyase) Aconitase 2 Aconitate hydratase, mitochondrial (Aconitase) (EC 4.2.1.3) |
Synonyms | |
Description | FUNCTION: Catalyzes the isomerization of citrate to isocitrate via cis-aconitate. . FUNCTION: Catalyzes the isomerization of citrate to isocitrate via cis-aconitate. . FUNCTION: Catalyzes the isomerization of citrate to isocitrate via cis-aconitate. . FUNCTION: Catalyzes the isomerization of citrate to isocitrate via cis-aconitate. . FUNCTION: Catalyzes the isomerization of citrate to isocitrate via cis-aconitate. . FUNCTION: Catalyzes the isomerization of citrate to isocitrate via cis-aconitate. . FUNCTION: Catalyzes the isomerization of citrate to isocitrate via cis-aconitate. . FUNCTION: Catalyzes the isomerization of citrate to isocitrate via cis-aconitate. . |
Accessions | A0A7I2V6A6 A2A274 A0A7I2V3U7 ENST00000677153.1 ENST00000679320.1 ENST00000678269.1 A0A7I2V5W7 ENST00000676792.1 ENST00000676959.1 ENST00000676714.1 ENST00000677532.1 ENST00000678688.1 ENST00000678819.1 ENST00000676664.1 A0A7I2V4I8 ENST00000678788.1 Q99798 A0A7I2V5A1 A0A7I2V614 ENST00000466237.2 A0A7I2V5T4 A0A7I2V3C8 ENST00000677698.1 A0A7I2V2Y4 Q71UF1 ENST00000396512.3 ENST00000216254.9 ENST00000677554.1 A0A7I2V5U4 ENST00000677007.1 A0A7I2V3F1 ENST00000677516.1 A0A7I2V499 A0A7I2V3U0 ENST00000676748.1 A0A7I2V538 A0A7I2V586 |