Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 6 studies | 24% ± 6% | |
classical monocyte | 6 studies | 23% ± 10% | |
oligodendrocyte | 6 studies | 26% ± 9% | |
CD4-positive, alpha-beta T cell | 3 studies | 19% ± 2% | |
non-classical monocyte | 3 studies | 25% ± 4% | |
epithelial cell | 3 studies | 32% ± 10% | |
glutamatergic neuron | 3 studies | 37% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 100% | 1233.57 | 577 / 578 | 100% | 27.98 | 1153 / 1155 |
breast | 100% | 900.91 | 459 / 459 | 99% | 43.88 | 1111 / 1118 |
brain | 100% | 1040.44 | 2636 / 2642 | 100% | 20.63 | 702 / 705 |
esophagus | 99% | 678.99 | 1427 / 1445 | 99% | 20.47 | 182 / 183 |
ovary | 99% | 623.15 | 179 / 180 | 98% | 15.17 | 421 / 430 |
stomach | 100% | 755.32 | 358 / 359 | 97% | 16.05 | 276 / 286 |
liver | 100% | 1557.89 | 226 / 226 | 96% | 22.76 | 390 / 406 |
pancreas | 98% | 535.74 | 323 / 328 | 97% | 16.00 | 172 / 178 |
uterus | 100% | 894.74 | 170 / 170 | 95% | 17.64 | 435 / 459 |
intestine | 100% | 998.29 | 966 / 966 | 94% | 13.76 | 496 / 527 |
prostate | 100% | 658.11 | 244 / 245 | 92% | 11.91 | 462 / 502 |
bladder | 100% | 760.14 | 21 / 21 | 90% | 14.62 | 455 / 504 |
thymus | 100% | 757.52 | 652 / 653 | 89% | 10.38 | 540 / 605 |
skin | 90% | 1320.41 | 1630 / 1809 | 96% | 25.18 | 454 / 472 |
kidney | 100% | 647.60 | 89 / 89 | 83% | 12.66 | 748 / 901 |
adrenal gland | 100% | 650.75 | 258 / 258 | 67% | 6.44 | 154 / 230 |
adipose | 100% | 967.78 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 30.18 | 29 / 29 |
spleen | 100% | 1451.77 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 5.37 | 1 / 1 |
muscle | 100% | 591.59 | 801 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 14.09 | 43 / 45 |
peripheral blood | 95% | 1471.24 | 883 / 929 | 0% | 0 | 0 / 0 |
blood vessel | 93% | 516.96 | 1248 / 1335 | 0% | 0 | 0 / 0 |
heart | 93% | 480.89 | 804 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 75% | 9.25 | 60 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0010172 | Biological process | embryonic body morphogenesis |
GO_0048863 | Biological process | stem cell differentiation |
GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
GO_0010629 | Biological process | negative regulation of gene expression |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0045892 | Biological process | negative regulation of DNA-templated transcription |
GO_0006355 | Biological process | regulation of DNA-templated transcription |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005634 | Cellular component | nucleus |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0003700 | Molecular function | DNA-binding transcription factor activity |
GO_0005515 | Molecular function | protein binding |
GO_0001227 | Molecular function | DNA-binding transcription repressor activity, RNA polymerase II-specific |
GO_0043565 | Molecular function | sequence-specific DNA binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0000976 | Molecular function | transcription cis-regulatory region binding |
Gene name | ZNF281 |
Protein name | Zinc finger protein 281 (GC-box-binding zinc finger protein 1) (Transcription factor ZBP-99) (Zinc finger DNA-binding protein 99) |
Synonyms | ZBP99 GZP1 |
Description | FUNCTION: Transcription repressor that plays a role in regulation of embryonic stem cells (ESCs) differentiation. Required for ESCs differentiation and acts by mediating autorepression of NANOG in ESCs: binds to the NANOG promoter and promotes association of NANOG protein to its own promoter and recruits the NuRD complex, which deacetylates histones. Not required for establishement and maintenance of ESCs (By similarity). Represses the transcription of a number of genes including GAST, ODC1 and VIM. Binds to the G-rich box in the enhancer region of these genes. . |
Accessions | Q9Y2X9 ENST00000367352.3 [Q9Y2X9-2] ENST00000367353.2 [Q9Y2X9-1] ENST00000294740.3 [Q9Y2X9-1] |