Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 20 studies | 33% ± 15% | |
astrocyte | 17 studies | 41% ± 20% | |
oligodendrocyte | 14 studies | 49% ± 19% | |
oligodendrocyte precursor cell | 13 studies | 43% ± 22% | |
fibroblast | 13 studies | 24% ± 10% | |
microglial cell | 11 studies | 37% ± 16% | |
GABAergic neuron | 9 studies | 47% ± 23% | |
glutamatergic neuron | 9 studies | 49% ± 24% | |
macrophage | 9 studies | 31% ± 14% | |
epithelial cell | 8 studies | 27% ± 11% | |
pericyte | 7 studies | 30% ± 12% | |
adipocyte | 7 studies | 32% ± 15% | |
amacrine cell | 6 studies | 30% ± 11% | |
smooth muscle cell | 6 studies | 29% ± 9% | |
neuron | 5 studies | 46% ± 18% | |
retinal bipolar neuron | 5 studies | 29% ± 10% | |
interneuron | 5 studies | 62% ± 21% | |
ciliated cell | 5 studies | 22% ± 3% | |
retina horizontal cell | 5 studies | 33% ± 14% | |
type II pneumocyte | 5 studies | 17% ± 1% | |
endothelial cell of lymphatic vessel | 5 studies | 27% ± 10% | |
B cell | 4 studies | 20% ± 6% | |
granule cell | 4 studies | 28% ± 10% | |
cardiac muscle cell | 4 studies | 28% ± 10% | |
retinal cone cell | 4 studies | 31% ± 3% | |
connective tissue cell | 4 studies | 20% ± 2% | |
type I pneumocyte | 4 studies | 17% ± 1% | |
basal cell | 4 studies | 24% ± 7% | |
progenitor cell | 3 studies | 31% ± 1% | |
GABAergic amacrine cell | 3 studies | 28% ± 14% | |
Mueller cell | 3 studies | 26% ± 4% | |
OFF-bipolar cell | 3 studies | 36% ± 14% | |
ON-bipolar cell | 3 studies | 35% ± 13% | |
glycinergic amacrine cell | 3 studies | 29% ± 10% | |
retinal ganglion cell | 3 studies | 29% ± 12% | |
retinal rod cell | 3 studies | 33% ± 3% | |
rod bipolar cell | 3 studies | 29% ± 17% | |
endothelial cell of vascular tree | 3 studies | 24% ± 9% | |
hepatocyte | 3 studies | 37% ± 16% | |
dendritic cell | 3 studies | 27% ± 4% | |
club cell | 3 studies | 22% ± 4% | |
goblet cell | 3 studies | 21% ± 1% | |
mesothelial cell | 3 studies | 30% ± 12% | |
T cell | 3 studies | 22% ± 5% | |
mast cell | 3 studies | 27% ± 2% | |
plasmacytoid dendritic cell | 3 studies | 21% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 3422.79 | 245 / 245 | 100% | 5.57 | 502 / 502 |
esophagus | 100% | 3435.59 | 1444 / 1445 | 100% | 4.69 | 183 / 183 |
breast | 100% | 4035.41 | 459 / 459 | 100% | 5.90 | 1116 / 1118 |
thymus | 100% | 3549.10 | 653 / 653 | 100% | 7.14 | 603 / 605 |
adrenal gland | 100% | 2938.05 | 258 / 258 | 100% | 5.36 | 229 / 230 |
lung | 100% | 2688.99 | 576 / 578 | 100% | 4.04 | 1151 / 1155 |
brain | 100% | 2688.57 | 2631 / 2642 | 100% | 5.68 | 703 / 705 |
pancreas | 100% | 2225.44 | 327 / 328 | 99% | 4.66 | 176 / 178 |
uterus | 100% | 5531.78 | 170 / 170 | 98% | 4.29 | 452 / 459 |
bladder | 100% | 4765.10 | 21 / 21 | 98% | 3.76 | 496 / 504 |
ovary | 100% | 4865.90 | 180 / 180 | 98% | 3.13 | 421 / 430 |
kidney | 100% | 2208.11 | 89 / 89 | 98% | 4.55 | 881 / 901 |
stomach | 100% | 2681.74 | 359 / 359 | 97% | 3.39 | 278 / 286 |
liver | 100% | 1710.88 | 226 / 226 | 97% | 3.31 | 394 / 406 |
intestine | 100% | 3227.87 | 966 / 966 | 96% | 3.38 | 507 / 527 |
skin | 100% | 2498.12 | 1808 / 1809 | 91% | 4.13 | 430 / 472 |
adipose | 100% | 3667.89 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3799.66 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 2575.69 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.58 | 1 / 1 |
muscle | 100% | 2461.92 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 1870.76 | 846 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 3.05 | 44 / 45 |
lymph node | 0% | 0 | 0 / 0 | 97% | 2.95 | 28 / 29 |
eye | 0% | 0 | 0 / 0 | 76% | 2.79 | 61 / 80 |
peripheral blood | 35% | 521.73 | 327 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006355 | Biological process | regulation of DNA-templated transcription |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005634 | Cellular component | nucleus |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZNF280D |
Protein name | Zinc finger protein 280D (Suppressor of hairy wing homolog 4) (Zinc finger protein 634) Zinc finger protein 280D |
Synonyms | ZNF634 KIAA1584 SUHW4 |
Description | FUNCTION: May function as a transcription factor. FUNCTION: May function as a transcription factor. . FUNCTION: May function as a transcription factor. . |
Accessions | H0YN90 ENST00000558320.5 [Q6N043-6] Q6N043 ENST00000559237.5 [Q6N043-2] ENST00000559000.6 ENST00000558067.5 [Q6N043-4] ENST00000559352.1 H0YL38 ENST00000267807.12 [Q6N043-1] ENST00000558002.5 H0YLA6 ENST00000560002.5 [Q6N043-3] |