Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 13 studies | 43% ± 15% | |
endothelial cell | 12 studies | 24% ± 9% | |
astrocyte | 10 studies | 31% ± 12% | |
adipocyte | 9 studies | 32% ± 12% | |
microglial cell | 8 studies | 24% ± 7% | |
oligodendrocyte precursor cell | 8 studies | 31% ± 12% | |
retinal rod cell | 6 studies | 26% ± 9% | |
GABAergic neuron | 6 studies | 36% ± 16% | |
epithelial cell | 5 studies | 31% ± 10% | |
fibroblast | 5 studies | 21% ± 2% | |
macrophage | 5 studies | 28% ± 5% | |
interneuron | 5 studies | 33% ± 20% | |
retinal cone cell | 4 studies | 20% ± 4% | |
cardiac muscle cell | 4 studies | 17% ± 1% | |
glutamatergic neuron | 4 studies | 51% ± 17% | |
endothelial cell of lymphatic vessel | 4 studies | 23% ± 3% | |
pericyte | 4 studies | 20% ± 5% | |
neuron | 4 studies | 39% ± 17% | |
plasma cell | 3 studies | 22% ± 4% | |
ciliated cell | 3 studies | 20% ± 3% | |
lymphocyte | 3 studies | 26% ± 6% | |
smooth muscle cell | 3 studies | 18% ± 3% | |
mast cell | 3 studies | 18% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 1645.02 | 459 / 459 | 100% | 13.35 | 1118 / 1118 |
esophagus | 100% | 1358.79 | 1445 / 1445 | 100% | 8.64 | 183 / 183 |
ovary | 100% | 1412.91 | 180 / 180 | 100% | 8.25 | 430 / 430 |
stomach | 100% | 992.45 | 359 / 359 | 100% | 7.86 | 286 / 286 |
brain | 100% | 1214.23 | 2640 / 2642 | 100% | 11.47 | 705 / 705 |
intestine | 100% | 1311.59 | 966 / 966 | 100% | 8.23 | 526 / 527 |
prostate | 100% | 1263.27 | 245 / 245 | 100% | 10.94 | 501 / 502 |
lung | 100% | 1178.60 | 576 / 578 | 100% | 9.65 | 1155 / 1155 |
bladder | 100% | 1346.05 | 21 / 21 | 100% | 8.42 | 502 / 504 |
adrenal gland | 100% | 2131.79 | 258 / 258 | 100% | 9.13 | 229 / 230 |
thymus | 100% | 1593.58 | 653 / 653 | 100% | 12.78 | 602 / 605 |
kidney | 100% | 1112.65 | 89 / 89 | 99% | 8.86 | 894 / 901 |
skin | 100% | 1846.65 | 1809 / 1809 | 99% | 9.96 | 467 / 472 |
uterus | 100% | 1473.68 | 170 / 170 | 99% | 8.96 | 454 / 459 |
pancreas | 100% | 761.57 | 327 / 328 | 99% | 9.28 | 176 / 178 |
liver | 100% | 725.98 | 226 / 226 | 95% | 4.85 | 387 / 406 |
adipose | 100% | 1561.81 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1261.30 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 7.57 | 29 / 29 |
muscle | 100% | 980.58 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1272.24 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 8.13 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.39 | 1 / 1 |
heart | 98% | 848.08 | 842 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 94% | 7.12 | 75 / 80 |
peripheral blood | 89% | 775.13 | 824 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0035800 | Molecular function | deubiquitinase activator activity |
GO_0005515 | Molecular function | protein binding |
Gene name | WDR20 |
Protein name | WD repeat domain 20, isoform CRA_a WD repeat domain 20 WD repeat-containing protein 20 (Protein DMR) |
Synonyms | hCG_24747 DKFZp686P0251 |
Description | FUNCTION: Regulator of deubiquitinating complexes. Activates deubiquitinating activity of complexes containing USP12 . Anchors at the base of the ubiquitin-contacting loop of USP12 and remotely modulates the catalytic center of the enzyme . Regulates shuttling of the USP12 deubiquitinase complex between the plasma membrane, cytoplasm and nucleus . . |
Accessions | Q5JPH5 ENST00000299135.6 [Q8TBZ3-8] G3V5V2 ENST00000555879.5 [Q8TBZ3-8] A0A088AWN2 ENST00000322340.9 [Q8TBZ3-3] ENST00000342702.8 [Q8TBZ3-1] H0YNU0 Q8TBZ3 ENST00000424963.6 ENST00000556094.1 ENST00000335263.9 [Q8TBZ3-2] H0YK31 ENST00000558854.5 ENST00000454394.2 [Q8TBZ3-7] ENST00000558567.5 ENST00000559478.1 H0YKE8 ENST00000556807.1 [Q8TBZ3-6] ENST00000556511.2 [Q8TBZ3-5] |