Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 25 studies | 32% ± 13% | |
astrocyte | 12 studies | 42% ± 17% | |
glutamatergic neuron | 11 studies | 52% ± 24% | |
smooth muscle cell | 11 studies | 21% ± 5% | |
GABAergic neuron | 10 studies | 48% ± 23% | |
oligodendrocyte precursor cell | 10 studies | 36% ± 15% | |
fibroblast | 10 studies | 22% ± 6% | |
oligodendrocyte | 10 studies | 32% ± 11% | |
type I pneumocyte | 9 studies | 33% ± 9% | |
microglial cell | 9 studies | 28% ± 12% | |
endothelial cell of lymphatic vessel | 9 studies | 32% ± 10% | |
adipocyte | 9 studies | 27% ± 8% | |
retinal rod cell | 8 studies | 28% ± 9% | |
epithelial cell | 8 studies | 33% ± 16% | |
neuron | 7 studies | 46% ± 17% | |
pericyte | 7 studies | 27% ± 12% | |
interneuron | 6 studies | 61% ± 17% | |
macrophage | 6 studies | 31% ± 11% | |
retina horizontal cell | 6 studies | 28% ± 11% | |
retinal cone cell | 6 studies | 25% ± 6% | |
ciliated cell | 6 studies | 25% ± 8% | |
type II pneumocyte | 6 studies | 28% ± 6% | |
basal cell | 6 studies | 35% ± 14% | |
abnormal cell | 5 studies | 25% ± 11% | |
retinal bipolar neuron | 5 studies | 23% ± 4% | |
retinal ganglion cell | 5 studies | 33% ± 9% | |
amacrine cell | 5 studies | 29% ± 4% | |
cardiac muscle cell | 5 studies | 31% ± 6% | |
club cell | 5 studies | 32% ± 11% | |
B cell | 4 studies | 18% ± 2% | |
granule cell | 4 studies | 37% ± 7% | |
progenitor cell | 4 studies | 26% ± 4% | |
vein endothelial cell | 4 studies | 28% ± 19% | |
lymphocyte | 4 studies | 20% ± 6% | |
endothelial cell of vascular tree | 4 studies | 26% ± 15% | |
connective tissue cell | 4 studies | 27% ± 7% | |
T cell | 4 studies | 20% ± 4% | |
goblet cell | 4 studies | 28% ± 14% | |
GABAergic interneuron | 3 studies | 42% ± 7% | |
myofibroblast cell | 3 studies | 25% ± 8% | |
capillary endothelial cell | 3 studies | 24% ± 5% | |
myeloid cell | 3 studies | 21% ± 3% | |
GABAergic amacrine cell | 3 studies | 37% ± 7% | |
ON-bipolar cell | 3 studies | 26% ± 6% | |
glycinergic amacrine cell | 3 studies | 29% ± 5% | |
rod bipolar cell | 3 studies | 32% ± 8% | |
hepatocyte | 3 studies | 33% ± 21% | |
dendritic cell | 3 studies | 27% ± 7% | |
neural progenitor cell | 3 studies | 34% ± 13% | |
ependymal cell | 3 studies | 31% ± 16% | |
monocyte | 3 studies | 20% ± 5% | |
mast cell | 3 studies | 21% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3323.00 | 1445 / 1445 | 100% | 29.52 | 183 / 183 |
brain | 100% | 2438.97 | 2640 / 2642 | 100% | 20.52 | 705 / 705 |
lung | 100% | 3304.85 | 577 / 578 | 100% | 30.85 | 1155 / 1155 |
breast | 100% | 2960.25 | 459 / 459 | 100% | 33.78 | 1116 / 1118 |
prostate | 100% | 3061.58 | 245 / 245 | 100% | 24.51 | 501 / 502 |
thymus | 100% | 5226.62 | 653 / 653 | 99% | 37.05 | 601 / 605 |
uterus | 100% | 3425.33 | 170 / 170 | 99% | 21.34 | 455 / 459 |
stomach | 100% | 2005.20 | 359 / 359 | 99% | 19.57 | 282 / 286 |
intestine | 100% | 3196.52 | 966 / 966 | 98% | 19.32 | 519 / 527 |
bladder | 100% | 3048.14 | 21 / 21 | 98% | 20.59 | 496 / 504 |
pancreas | 100% | 1884.62 | 328 / 328 | 98% | 26.37 | 175 / 178 |
adrenal gland | 100% | 4246.64 | 258 / 258 | 98% | 24.81 | 226 / 230 |
kidney | 100% | 2497.10 | 89 / 89 | 98% | 20.25 | 879 / 901 |
ovary | 100% | 3447.92 | 180 / 180 | 97% | 15.03 | 419 / 430 |
liver | 100% | 1501.38 | 225 / 226 | 87% | 12.50 | 353 / 406 |
skin | 100% | 3115.82 | 1808 / 1809 | 86% | 11.78 | 406 / 472 |
adipose | 100% | 2980.60 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3850.08 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 17.65 | 29 / 29 |
muscle | 100% | 4902.67 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1861.15 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 19.86 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 19.56 | 1 / 1 |
heart | 97% | 2188.73 | 831 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 43% | 4.13 | 34 / 80 |
peripheral blood | 31% | 1252.49 | 292 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0098609 | Biological process | cell-cell adhesion |
GO_0002142 | Cellular component | stereocilia ankle link complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0001669 | Cellular component | acrosomal vesicle |
GO_0005912 | Cellular component | adherens junction |
GO_0005886 | Cellular component | plasma membrane |
GO_0060171 | Cellular component | stereocilium membrane |
GO_0017022 | Molecular function | myosin binding |
Gene name | VEZT |
Protein name | Vezatin Vezatin, adherens junctions transmembrane protein |
Synonyms | |
Description | FUNCTION: Plays a pivotal role in the establishment of adherens junctions and their maintenance in adult life. Required for morphogenesis of the preimplantation embryo, and for the implantation process. .; FUNCTION: (Microbial infection) In case of Listeria infection, promotes bacterial internalization by participating in myosin VIIa recruitment to the entry site. . |
Accessions | F8VVS3 ENST00000546445.5 F8VS43 ENST00000552821.5 ENST00000548371.5 F8W088 F8W0S0 ENST00000548455.5 [Q9HBM0-6] ENST00000551311.5 F8VPN9 ENST00000547484.5 [Q9HBM0-6] F8VUG0 ENST00000549002.5 ENST00000547611.5 ENST00000551039.5 ENST00000550803.5 [Q9HBM0-6] F8W8C2 ENST00000552660.5 [Q9HBM0-6] ENST00000436874.6 [Q9HBM0-1] ENST00000547997.5 [Q9HBM0-6] Q9HBM0 F8VXA0 ENST00000551472.5 ENST00000549624.5 [Q9HBM0-6] ENST00000548838.5 F8VRY3 F8W048 ENST00000397792.8 ENST00000546557.5 [Q9HBM0-6] F8VUB7 ENST00000548822.5 ENST00000548245.5 ENST00000551994.5 |