Name | Number of supported studies | Average coverage | |
---|---|---|---|
plasmacytoid dendritic cell | 23 studies | 70% ± 14% | |
endothelial cell | 19 studies | 29% ± 10% | |
naive B cell | 17 studies | 31% ± 7% | |
B cell | 14 studies | 24% ± 7% | |
type I pneumocyte | 12 studies | 64% ± 24% | |
basal cell | 11 studies | 36% ± 19% | |
goblet cell | 11 studies | 53% ± 19% | |
type II pneumocyte | 10 studies | 33% ± 18% | |
epithelial cell | 10 studies | 49% ± 22% | |
secretory cell | 10 studies | 40% ± 14% | |
ciliated cell | 9 studies | 32% ± 13% | |
endothelial cell of vascular tree | 9 studies | 29% ± 8% | |
club cell | 8 studies | 33% ± 8% | |
capillary endothelial cell | 8 studies | 34% ± 9% | |
glutamatergic neuron | 7 studies | 46% ± 24% | |
respiratory goblet cell | 6 studies | 48% ± 13% | |
memory B cell | 6 studies | 18% ± 2% | |
neuron | 5 studies | 37% ± 14% | |
endothelial cell of artery | 5 studies | 30% ± 11% | |
duct epithelial cell | 4 studies | 37% ± 12% | |
type B pancreatic cell | 4 studies | 62% ± 21% | |
enterocyte | 4 studies | 25% ± 6% | |
enteroendocrine cell | 4 studies | 42% ± 16% | |
vein endothelial cell | 4 studies | 23% ± 3% | |
transit amplifying cell | 4 studies | 19% ± 4% | |
precursor B cell | 4 studies | 35% ± 9% | |
immature B cell | 4 studies | 39% ± 14% | |
mucus secreting cell | 4 studies | 51% ± 28% | |
luminal hormone-sensing cell of mammary gland | 4 studies | 48% ± 11% | |
GABAergic neuron | 4 studies | 47% ± 5% | |
abnormal cell | 4 studies | 30% ± 18% | |
ionocyte | 3 studies | 26% ± 3% | |
intestinal crypt stem cell | 3 studies | 22% ± 3% | |
progenitor cell | 3 studies | 52% ± 11% | |
retinal bipolar neuron | 3 studies | 35% ± 13% | |
plasma cell | 3 studies | 31% ± 14% | |
brush cell | 3 studies | 29% ± 8% | |
serous secreting cell | 3 studies | 53% ± 25% | |
rod bipolar cell | 3 studies | 30% ± 10% | |
luminal cell of prostate epithelium | 3 studies | 27% ± 8% | |
dendritic cell | 3 studies | 26% ± 13% | |
interneuron | 3 studies | 44% ± 12% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 5494.48 | 459 / 459 | 99% | 596.93 | 1106 / 1118 |
pancreas | 100% | 4349.66 | 328 / 328 | 98% | 177.73 | 174 / 178 |
lung | 100% | 7830.57 | 577 / 578 | 98% | 290.63 | 1128 / 1155 |
prostate | 95% | 2011.53 | 233 / 245 | 99% | 360.58 | 497 / 502 |
thymus | 100% | 2274.40 | 651 / 653 | 91% | 123.24 | 549 / 605 |
stomach | 88% | 2842.87 | 316 / 359 | 95% | 176.95 | 271 / 286 |
adrenal gland | 100% | 4295.90 | 258 / 258 | 81% | 126.46 | 187 / 230 |
bladder | 86% | 1916.24 | 18 / 21 | 89% | 161.60 | 451 / 504 |
intestine | 74% | 1986.67 | 711 / 966 | 95% | 207.01 | 503 / 527 |
brain | 90% | 3002.64 | 2387 / 2642 | 74% | 82.06 | 521 / 705 |
uterus | 86% | 1152.83 | 147 / 170 | 77% | 123.27 | 352 / 459 |
esophagus | 69% | 950.08 | 1002 / 1445 | 88% | 166.04 | 161 / 183 |
liver | 81% | 2571.58 | 183 / 226 | 35% | 53.12 | 144 / 406 |
ureter | 0% | 0 | 0 / 0 | 100% | 118.50 | 1 / 1 |
adipose | 100% | 4640.32 | 1203 / 1204 | 0% | 0 | 0 / 0 |
spleen | 96% | 1911.39 | 232 / 241 | 0% | 0 | 0 / 0 |
heart | 87% | 1099.57 | 750 / 861 | 0% | 0 | 0 / 0 |
skin | 66% | 725.44 | 1202 / 1809 | 15% | 30.59 | 69 / 472 |
kidney | 49% | 491.22 | 44 / 89 | 26% | 22.66 | 235 / 901 |
tonsil | 0% | 0 | 0 / 0 | 67% | 61.34 | 30 / 45 |
ovary | 9% | 83.94 | 16 / 180 | 47% | 42.46 | 201 / 430 |
lymph node | 0% | 0 | 0 / 0 | 48% | 56.79 | 14 / 29 |
muscle | 36% | 312.09 | 286 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 23% | 283.93 | 313 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 1% | 8.29 | 9 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_1903169 | Biological process | regulation of calcium ion transmembrane transport |
GO_0016020 | Cellular component | membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0005246 | Molecular function | calcium channel regulator activity |
Gene name | TSPAN13 |
Protein name | TM4SF13 protein (Tetraspanin 13, isoform CRA_a) (Transmembrane 4 superfamily member 13) Tetraspanin-13 (Tspan-13) (Tetraspan NET-6) (Transmembrane 4 superfamily member 13) |
Synonyms | tcag7.1203 UNQ260/PRO296 NET6 hCG_17375 TM4SF13 |
Description | |
Accessions | Q6FGK0 O95857 ENST00000262067.5 |