Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 20 studies | 23% ± 7% | |
type I pneumocyte | 11 studies | 34% ± 15% | |
fibroblast | 8 studies | 22% ± 6% | |
epithelial cell | 8 studies | 42% ± 21% | |
macrophage | 7 studies | 19% ± 4% | |
type II pneumocyte | 6 studies | 26% ± 11% | |
enterocyte | 6 studies | 24% ± 3% | |
basal cell | 6 studies | 32% ± 9% | |
monocyte | 5 studies | 18% ± 3% | |
ciliated cell | 5 studies | 34% ± 11% | |
hepatocyte | 5 studies | 51% ± 17% | |
natural killer cell | 4 studies | 17% ± 1% | |
squamous epithelial cell | 4 studies | 39% ± 23% | |
goblet cell | 4 studies | 20% ± 5% | |
myeloid cell | 4 studies | 27% ± 10% | |
mesothelial cell | 4 studies | 28% ± 6% | |
abnormal cell | 4 studies | 29% ± 13% | |
astrocyte | 4 studies | 28% ± 7% | |
glutamatergic neuron | 4 studies | 50% ± 20% | |
oligodendrocyte precursor cell | 4 studies | 26% ± 8% | |
oligodendrocyte | 4 studies | 23% ± 2% | |
endothelial cell of lymphatic vessel | 3 studies | 21% ± 3% | |
classical monocyte | 3 studies | 26% ± 7% | |
extravillous trophoblast | 3 studies | 45% ± 10% | |
placental villous trophoblast | 3 studies | 39% ± 15% | |
club cell | 3 studies | 31% ± 12% | |
secretory cell | 3 studies | 26% ± 9% | |
luminal hormone-sensing cell of mammary gland | 3 studies | 19% ± 3% | |
GABAergic neuron | 3 studies | 49% ± 7% | |
pancreatic ductal cell | 3 studies | 48% ± 21% | |
pericyte | 3 studies | 19% ± 2% | |
transit amplifying cell | 3 studies | 27% ± 15% | |
interneuron | 3 studies | 39% ± 22% | |
neuron | 3 studies | 31% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 2585.57 | 459 / 459 | 100% | 19.03 | 1118 / 1118 |
esophagus | 100% | 3270.80 | 1445 / 1445 | 100% | 19.96 | 183 / 183 |
intestine | 100% | 3231.80 | 966 / 966 | 100% | 11.53 | 527 / 527 |
liver | 100% | 5531.41 | 226 / 226 | 100% | 25.45 | 406 / 406 |
lung | 100% | 4138.43 | 578 / 578 | 100% | 17.56 | 1155 / 1155 |
ovary | 100% | 3693.59 | 180 / 180 | 100% | 12.80 | 430 / 430 |
prostate | 100% | 2779.18 | 245 / 245 | 100% | 9.88 | 502 / 502 |
stomach | 100% | 3028.38 | 359 / 359 | 100% | 12.82 | 286 / 286 |
uterus | 100% | 2584.52 | 170 / 170 | 100% | 16.43 | 459 / 459 |
brain | 100% | 2448.27 | 2637 / 2642 | 100% | 12.33 | 705 / 705 |
bladder | 100% | 2799.57 | 21 / 21 | 100% | 14.91 | 503 / 504 |
kidney | 100% | 2551.66 | 89 / 89 | 100% | 12.33 | 897 / 901 |
thymus | 100% | 3150.15 | 652 / 653 | 100% | 13.71 | 603 / 605 |
pancreas | 100% | 2713.77 | 328 / 328 | 99% | 14.35 | 177 / 178 |
skin | 100% | 4183.67 | 1809 / 1809 | 99% | 17.04 | 468 / 472 |
adrenal gland | 100% | 6240.13 | 258 / 258 | 99% | 13.07 | 228 / 230 |
adipose | 100% | 3164.84 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 9.63 | 29 / 29 |
muscle | 100% | 3461.24 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 3036.46 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 13.24 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 14.28 | 1 / 1 |
blood vessel | 100% | 2225.05 | 1331 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 2061.40 | 852 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 2904.65 | 919 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 94% | 7.12 | 75 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007029 | Biological process | endoplasmic reticulum organization |
GO_0061024 | Biological process | membrane organization |
GO_0032781 | Biological process | positive regulation of ATP-dependent activity |
GO_0090435 | Biological process | protein localization to nuclear envelope |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0031965 | Cellular component | nuclear membrane |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0051117 | Molecular function | ATPase binding |
GO_0005515 | Molecular function | protein binding |
GO_0001671 | Molecular function | ATPase activator activity |
Gene name | TOR1AIP2 |
Protein name | Torsin-1A-interacting protein 2 (Lumenal domain-like LAP1) Torsin 1A interacting protein 2 Torsin-1A-interacting protein 2, isoform IFRG15 (15 kDa interferon-responsive protein) (IFRG15) |
Synonyms | IFRG15 LULL1 |
Description | FUNCTION: Required for endoplasmic reticulum integrity. Regulates the distribution of TOR1A between the endoplasmic reticulum and the nuclear envelope as well as induces TOR1A, TOR1B and TOR3A ATPase activity. . |
Accessions | ENST00000495650.1 ENST00000482587.5 [Q9H496-1] Q9H496 A0A096LNM1 ENST00000367612.7 [Q8NFQ8-1] Q8NFQ8 ENST00000609928.6 [Q8NFQ8-1] |