Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| endothelial cell | 15 studies | 31% ± 14% | |
| astrocyte | 13 studies | 35% ± 12% | |
| macrophage | 13 studies | 38% ± 19% | |
| microglial cell | 11 studies | 49% ± 15% | |
| glutamatergic neuron | 9 studies | 36% ± 20% | |
| oligodendrocyte precursor cell | 9 studies | 30% ± 11% | |
| fibroblast | 9 studies | 28% ± 11% | |
| type I pneumocyte | 8 studies | 29% ± 11% | |
| GABAergic neuron | 8 studies | 41% ± 18% | |
| myeloid cell | 8 studies | 31% ± 11% | |
| pericyte | 7 studies | 29% ± 13% | |
| epithelial cell | 7 studies | 37% ± 15% | |
| smooth muscle cell | 7 studies | 28% ± 7% | |
| interneuron | 6 studies | 45% ± 18% | |
| dendritic cell | 6 studies | 27% ± 6% | |
| basal cell | 6 studies | 28% ± 17% | |
| neuron | 5 studies | 40% ± 14% | |
| adipocyte | 5 studies | 23% ± 3% | |
| ciliated cell | 5 studies | 25% ± 5% | |
| monocyte | 5 studies | 31% ± 11% | |
| type II pneumocyte | 5 studies | 29% ± 10% | |
| mast cell | 5 studies | 21% ± 5% | |
| retina horizontal cell | 4 studies | 20% ± 2% | |
| club cell | 4 studies | 29% ± 11% | |
| endothelial cell of lymphatic vessel | 4 studies | 30% ± 7% | |
| goblet cell | 4 studies | 32% ± 11% | |
| oligodendrocyte | 4 studies | 24% ± 2% | |
| classical monocyte | 3 studies | 25% ± 6% | |
| hematopoietic precursor cell | 3 studies | 28% ± 6% | |
| non-classical monocyte | 3 studies | 21% ± 3% | |
| GABAergic interneuron | 3 studies | 33% ± 8% | |
| granule cell | 3 studies | 25% ± 6% | |
| mononuclear phagocyte | 3 studies | 23% ± 4% | |
| rod bipolar cell | 3 studies | 22% ± 1% | |
| Mueller cell | 3 studies | 22% ± 5% | |
| retinal pigment epithelial cell | 3 studies | 35% ± 24% | |
| ependymal cell | 3 studies | 38% ± 12% | |
| hematopoietic stem cell | 3 studies | 25% ± 6% | |
| alveolar macrophage | 3 studies | 29% ± 9% | |
| respiratory goblet cell | 3 studies | 33% ± 12% | |
| transit amplifying cell | 3 studies | 33% ± 23% | |
| renal principal cell | 3 studies | 18% ± 4% | |
| mucus secreting cell | 3 studies | 28% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 13683.68 | 1445 / 1445 | 100% | 103.30 | 183 / 183 |
| intestine | 100% | 14775.28 | 966 / 966 | 100% | 65.61 | 525 / 527 |
| prostate | 100% | 13373.71 | 245 / 245 | 99% | 46.35 | 498 / 502 |
| breast | 100% | 10210.18 | 459 / 459 | 99% | 50.35 | 1109 / 1118 |
| stomach | 100% | 9272.40 | 359 / 359 | 99% | 78.59 | 283 / 286 |
| thymus | 100% | 11412.07 | 653 / 653 | 99% | 39.54 | 597 / 605 |
| skin | 100% | 10900.65 | 1808 / 1809 | 99% | 39.84 | 465 / 472 |
| bladder | 100% | 13968.67 | 21 / 21 | 98% | 41.73 | 496 / 504 |
| ovary | 100% | 13960.10 | 180 / 180 | 98% | 64.84 | 423 / 430 |
| pancreas | 99% | 5127.53 | 326 / 328 | 99% | 39.49 | 176 / 178 |
| lung | 100% | 10766.74 | 577 / 578 | 98% | 51.62 | 1131 / 1155 |
| uterus | 100% | 18099.18 | 170 / 170 | 98% | 39.30 | 448 / 459 |
| kidney | 100% | 7401.10 | 89 / 89 | 95% | 30.18 | 860 / 901 |
| brain | 95% | 5884.86 | 2497 / 2642 | 98% | 39.47 | 694 / 705 |
| adrenal gland | 99% | 5681.04 | 256 / 258 | 90% | 20.06 | 206 / 230 |
| liver | 100% | 4032.21 | 225 / 226 | 87% | 23.12 | 354 / 406 |
| blood vessel | 100% | 16123.23 | 1335 / 1335 | 0% | 0 | 0 / 0 |
| spleen | 100% | 7836.66 | 241 / 241 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 100% | 17.28 | 1 / 1 |
| adipose | 100% | 8968.46 | 1203 / 1204 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 98% | 30.94 | 44 / 45 |
| eye | 0% | 0 | 0 / 0 | 98% | 23.48 | 78 / 80 |
| heart | 95% | 4223.52 | 815 / 861 | 0% | 0 | 0 / 0 |
| muscle | 92% | 3159.37 | 741 / 803 | 0% | 0 | 0 / 0 |
| peripheral blood | 91% | 4892.57 | 849 / 929 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 83% | 17.27 | 24 / 29 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0005654 | Cellular component | nucleoplasm |
| GO_0005829 | Cellular component | cytosol |
| GO_0031965 | Cellular component | nuclear membrane |
| GO_0005739 | Cellular component | mitochondrion |
| GO_0003682 | Molecular function | chromatin binding |
| Gene name | TNRC18 |
| Protein name | TNRC18 protein Trinucleotide repeat-containing gene 18 protein (Long CAG trinucleotide repeat-containing gene 79 protein) HCG96198, isoform CRA_d (Trinucleotide repeat containing 18) Trinucleotide repeat containing 18 |
| Synonyms | KIAA1856 CAGL79 hCG_96198 |
| Description | |
| Accessions | O15417 ENST00000430969.6 [O15417-1] ENST00000399537.8 H9KVB4 C9J9K1 H7C177 ENST00000434361.5 H7C0N9 A8MTZ4 H7BXS9 ENST00000413081.1 ENST00000455076.1 A3KMH2 ENST00000328270.3 ENST00000440081.2 ENST00000399434.2 H7C3U5 |