Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 35 studies | 37% ± 19% | |
fibroblast | 30 studies | 46% ± 20% | |
classical monocyte | 21 studies | 33% ± 14% | |
non-classical monocyte | 21 studies | 37% ± 16% | |
monocyte | 19 studies | 35% ± 14% | |
mast cell | 12 studies | 34% ± 9% | |
conventional dendritic cell | 12 studies | 29% ± 15% | |
dendritic cell | 12 studies | 40% ± 18% | |
connective tissue cell | 10 studies | 40% ± 21% | |
enterocyte | 8 studies | 42% ± 19% | |
myeloid cell | 8 studies | 41% ± 11% | |
mesothelial cell | 8 studies | 36% ± 12% | |
epithelial cell of proximal tubule | 7 studies | 51% ± 18% | |
epithelial cell | 7 studies | 48% ± 22% | |
goblet cell | 7 studies | 35% ± 16% | |
myofibroblast cell | 6 studies | 41% ± 19% | |
glial cell | 6 studies | 58% ± 17% | |
microglial cell | 6 studies | 38% ± 16% | |
brush cell | 5 studies | 58% ± 13% | |
hepatocyte | 5 studies | 63% ± 22% | |
pancreatic A cell | 4 studies | 85% ± 12% | |
mononuclear phagocyte | 4 studies | 45% ± 15% | |
intestinal crypt stem cell | 4 studies | 35% ± 11% | |
retinal bipolar neuron | 4 studies | 34% ± 12% | |
abnormal cell | 4 studies | 36% ± 24% | |
kidney loop of Henle epithelial cell | 4 studies | 39% ± 10% | |
pericyte | 4 studies | 17% ± 1% | |
progenitor cell | 4 studies | 37% ± 13% | |
adventitial cell | 4 studies | 30% ± 15% | |
pancreatic D cell | 3 studies | 62% ± 26% | |
transit amplifying cell | 3 studies | 29% ± 7% | |
ON-bipolar cell | 3 studies | 41% ± 7% | |
endothelial cell | 3 studies | 25% ± 6% | |
neuroendocrine cell | 3 studies | 73% ± 3% | |
astrocyte | 3 studies | 24% ± 8% | |
retinal pigment epithelial cell | 3 studies | 40% ± 17% | |
tissue-resident macrophage | 3 studies | 42% ± 18% | |
intermediate monocyte | 3 studies | 53% ± 10% | |
inflammatory macrophage | 3 studies | 37% ± 29% | |
enteroendocrine cell | 3 studies | 43% ± 19% | |
Schwann cell | 3 studies | 54% ± 23% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
intestine | 9 studies | 36% ± 18% | |
kidney | 7 studies | 28% ± 12% | |
lung | 4 studies | 18% ± 2% | |
peripheral blood | 4 studies | 19% ± 2% | |
pancreas | 4 studies | 46% ± 21% | |
liver | 4 studies | 33% ± 6% | |
eye | 3 studies | 21% ± 7% | |
breast | 3 studies | 18% ± 1% | |
uterus | 3 studies | 21% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 100% | 41437.71 | 226 / 226 | 97% | 1402.92 | 395 / 406 |
stomach | 100% | 3659.24 | 359 / 359 | 95% | 345.02 | 272 / 286 |
intestine | 100% | 9398.12 | 965 / 966 | 91% | 367.73 | 480 / 527 |
kidney | 100% | 12033.29 | 89 / 89 | 89% | 844.05 | 805 / 901 |
lung | 99% | 4718.91 | 575 / 578 | 77% | 172.59 | 892 / 1155 |
breast | 99% | 4076.95 | 454 / 459 | 65% | 124.08 | 726 / 1118 |
pancreas | 66% | 1309.02 | 216 / 328 | 93% | 328.95 | 165 / 178 |
esophagus | 96% | 2907.05 | 1384 / 1445 | 54% | 118.57 | 99 / 183 |
bladder | 90% | 3698.52 | 19 / 21 | 52% | 168.19 | 262 / 504 |
ovary | 100% | 6601.14 | 180 / 180 | 42% | 68.67 | 181 / 430 |
adrenal gland | 83% | 1612.28 | 215 / 258 | 43% | 126.07 | 100 / 230 |
uterus | 83% | 1692.88 | 141 / 170 | 43% | 83.57 | 199 / 459 |
thymus | 87% | 1733.45 | 567 / 653 | 36% | 44.89 | 216 / 605 |
brain | 68% | 1186.56 | 1797 / 2642 | 42% | 94.06 | 298 / 705 |
skin | 68% | 1357.90 | 1227 / 1809 | 42% | 81.22 | 198 / 472 |
lymph node | 0% | 0 | 0 / 0 | 100% | 421.55 | 29 / 29 |
spleen | 100% | 4258.98 | 241 / 241 | 0% | 0 | 0 / 0 |
adipose | 99% | 4222.85 | 1193 / 1204 | 0% | 0 | 0 / 0 |
prostate | 91% | 2488.79 | 223 / 245 | 7% | 8.12 | 37 / 502 |
heart | 91% | 4783.61 | 782 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 59% | 1626.94 | 788 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 51% | 77.23 | 23 / 45 |
peripheral blood | 46% | 1698.67 | 430 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 13% | 11.51 | 10 / 80 |
muscle | 6% | 74.78 | 50 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0030154 | Biological process | cell differentiation |
GO_2001199 | Biological process | negative regulation of dendritic cell differentiation |
GO_0009887 | Biological process | animal organ morphogenesis |
GO_0031965 | Cellular component | nuclear membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | TMEM176B |
Protein name | Transmembrane protein 176B (Protein LR8) |
Synonyms | LR8 |
Description | FUNCTION: May play a role in the process of maturation of dendritic cells. Required for the development of cerebellar granule cells (By similarity). . |
Accessions | ENST00000450753.2 [Q3YBM2-2] ENST00000492607.5 [Q3YBM2-1] ENST00000429904.6 [Q3YBM2-1] ENST00000326442.10 [Q3YBM2-1] Q3YBM2 ENST00000447204.6 [Q3YBM2-1] |