Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 8 studies | 27% ± 7% | |
myeloid cell | 5 studies | 22% ± 4% | |
microglial cell | 5 studies | 23% ± 6% |
Insufficient scRNA-seq data for expression of TMEM106A at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 100% | 526.29 | 653 / 653 | 99% | 8.47 | 601 / 605 |
breast | 100% | 411.39 | 459 / 459 | 98% | 9.74 | 1100 / 1118 |
lung | 100% | 597.93 | 577 / 578 | 95% | 7.76 | 1100 / 1155 |
kidney | 100% | 934.17 | 89 / 89 | 95% | 15.27 | 853 / 901 |
pancreas | 100% | 242.68 | 327 / 328 | 94% | 6.81 | 168 / 178 |
ovary | 99% | 550.94 | 179 / 180 | 91% | 5.25 | 391 / 430 |
uterus | 100% | 466.05 | 170 / 170 | 86% | 4.66 | 394 / 459 |
esophagus | 91% | 206.28 | 1315 / 1445 | 93% | 7.20 | 171 / 183 |
stomach | 97% | 254.01 | 350 / 359 | 86% | 5.89 | 247 / 286 |
intestine | 100% | 343.26 | 966 / 966 | 81% | 4.61 | 429 / 527 |
skin | 84% | 187.51 | 1522 / 1809 | 95% | 9.26 | 447 / 472 |
adrenal gland | 98% | 299.04 | 254 / 258 | 62% | 2.63 | 143 / 230 |
bladder | 100% | 391.38 | 21 / 21 | 59% | 3.41 | 299 / 504 |
prostate | 100% | 368.81 | 245 / 245 | 53% | 1.89 | 268 / 502 |
liver | 74% | 136.30 | 167 / 226 | 52% | 2.58 | 211 / 406 |
brain | 47% | 71.41 | 1236 / 2642 | 77% | 4.60 | 542 / 705 |
lymph node | 0% | 0 | 0 / 0 | 100% | 12.47 | 29 / 29 |
spleen | 100% | 1080.44 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.46 | 1 / 1 |
adipose | 100% | 510.85 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 369.97 | 1329 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 551.25 | 910 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 98% | 7.48 | 78 / 80 |
tonsil | 0% | 0 | 0 / 0 | 91% | 4.15 | 41 / 45 |
heart | 89% | 166.82 | 765 / 861 | 0% | 0 | 0 / 0 |
muscle | 31% | 32.62 | 249 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0032731 | Biological process | positive regulation of interleukin-1 beta production |
GO_1904407 | Biological process | positive regulation of nitric oxide metabolic process |
GO_0035781 | Biological process | CD86 biosynthetic process |
GO_0042116 | Biological process | macrophage activation |
GO_0045348 | Biological process | positive regulation of MHC class II biosynthetic process |
GO_0043123 | Biological process | positive regulation of canonical NF-kappaB signal transduction |
GO_0043410 | Biological process | positive regulation of MAPK cascade |
GO_0032760 | Biological process | positive regulation of tumor necrosis factor production |
GO_0008150 | Biological process | biological_process |
GO_0032755 | Biological process | positive regulation of interleukin-6 production |
GO_0045087 | Biological process | innate immune response |
GO_0035780 | Biological process | CD80 biosynthetic process |
GO_0005886 | Cellular component | plasma membrane |
GO_0005515 | Molecular function | protein binding |
GO_0003674 | Molecular function | molecular_function |
Gene name | TMEM106A |
Protein name | Transmembrane protein 106A |
Synonyms | |
Description | FUNCTION: Activates macrophages and polarizes them into M1-like macrophages through the activation of the MAPK and NF-kappaB signaling pathway. Upon activation, up-regulates the expression of CD80, CD86, CD69 and MHC II on macrophages, and induces the release of pro-inflammatory cytokines such as TNF, IL1B, IL6, CCL2 and nitric oxide (By similarity). May play a role in inhibition of proliferation and migration . . |
Accessions | ENST00000588659.5 [Q96A25-1] ENST00000536052.5 ENST00000612339.4 [Q96A25-1] ENST00000588693.5 K7ERE2 Q96A25 B7Z779 ENST00000541594.5 [Q96A25-2] |