TM4SF1 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
endothelial cell	45 studies	67% ± 24%	Explore
endothelial cell of lymphatic vessel	28 studies	65% ± 26%	Explore
pericyte	19 studies	38% ± 20%	Explore
basal cell	18 studies	55% ± 26%	Explore
smooth muscle cell	17 studies	44% ± 18%	Explore
capillary endothelial cell	17 studies	67% ± 19%	Explore
fibroblast	17 studies	29% ± 11%	Explore
vein endothelial cell	16 studies	66% ± 23%	Explore
endothelial cell of artery	15 studies	78% ± 20%	Explore
endothelial cell of vascular tree	15 studies	74% ± 30%	Explore
mesothelial cell	13 studies	59% ± 20%	Explore
epithelial cell	10 studies	67% ± 21%	Explore
secretory cell	10 studies	68% ± 20%	Explore
type I pneumocyte	9 studies	42% ± 18%	Explore
type II pneumocyte	8 studies	33% ± 12%	Explore
club cell	8 studies	36% ± 25%	Explore
respiratory goblet cell	6 studies	33% ± 15%	Explore
connective tissue cell	6 studies	27% ± 10%	Explore
ciliated cell	6 studies	45% ± 17%	Explore
ionocyte	5 studies	35% ± 15%	Explore
mucus secreting cell	5 studies	39% ± 13%	Explore
duct epithelial cell	4 studies	53% ± 16%	Explore
squamous epithelial cell	4 studies	43% ± 21%	Explore
glomerular endothelial cell	4 studies	78% ± 6%	Explore
myofibroblast cell	4 studies	28% ± 7%	Explore
abnormal cell	4 studies	44% ± 19%	Explore
acinar cell	4 studies	63% ± 15%	Explore
endothelial cell of sinusoid	4 studies	53% ± 29%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	84% ± 7%	Explore
serous secreting cell	3 studies	23% ± 0%	Explore
goblet cell	3 studies	44% ± 14%	Explore
myoepithelial cell	3 studies	49% ± 8%	Explore
luminal cell of prostate epithelium	3 studies	87% ± 4%	Explore
pancreatic ductal cell	3 studies	88% ± 2%	Explore
keratinocyte	3 studies	27% ± 6%	Explore
progenitor cell of mammary luminal epithelium	3 studies	70% ± 34%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
lung	10 studies	32% ± 14%	Explore
pancreas	5 studies	29% ± 8%	Explore
heart	4 studies	18% ± 3%	Explore
uterus	4 studies	31% ± 5%	Explore
prostate	4 studies	73% ± 18%	Explore
breast	4 studies	48% ± 19%	Explore
esophagus	3 studies	36% ± 13%	Explore
skin	3 studies	23% ± 7%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
lung	100%	18677.67	577 / 578	96%	374.35	1108 / 1155
esophagus	93%	8603.22	1339 / 1445	97%	323.29	178 / 183
breast	100%	17614.58	459 / 459	89%	308.71	996 / 1118
prostate	98%	5694.93	240 / 245	90%	153.47	452 / 502
stomach	97%	7803.83	349 / 359	91%	201.84	259 / 286
ovary	86%	3852.39	154 / 180	98%	346.52	422 / 430
pancreas	90%	6745.77	296 / 328	92%	520.10	164 / 178
intestine	89%	4846.88	860 / 966	91%	194.59	479 / 527
uterus	96%	5418.32	164 / 170	79%	236.80	364 / 459
kidney	97%	6634.80	86 / 89	71%	112.81	643 / 901
thymus	98%	6665.84	641 / 653	67%	173.73	406 / 605
bladder	76%	6036.29	16 / 21	69%	174.83	349 / 504
skin	84%	4884.22	1516 / 1809	35%	53.85	165 / 472
adrenal gland	88%	3482.76	226 / 258	30%	33.40	68 / 230
adipose	100%	21675.69	1203 / 1204	0%	0	0 / 0
spleen	100%	7015.29	240 / 241	0%	0	0 / 0
heart	99%	8182.54	856 / 861	0%	0	0 / 0
blood vessel	99%	12360.88	1326 / 1335	0%	0	0 / 0
tonsil	0%	0	0 / 0	93%	223.41	42 / 45
liver	29%	1482.74	65 / 226	57%	135.86	231 / 406
brain	40%	1709.66	1048 / 2642	19%	17.25	134 / 705
muscle	51%	1587.14	413 / 803	0%	0	0 / 0
peripheral blood	1%	21.92	5 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1