Name | Number of supported studies | Average coverage | |
---|---|---|---|
microglial cell | 6 studies | 25% ± 9% | |
macrophage | 5 studies | 21% ± 7% |
Insufficient scRNA-seq data for expression of TLR5 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 99% | 740.17 | 242 / 245 | 98% | 4.15 | 492 / 502 |
breast | 95% | 654.46 | 438 / 459 | 99% | 9.18 | 1112 / 1118 |
ovary | 100% | 2126.78 | 180 / 180 | 94% | 4.24 | 406 / 430 |
lung | 98% | 715.19 | 566 / 578 | 95% | 5.23 | 1096 / 1155 |
thymus | 97% | 411.30 | 631 / 653 | 96% | 3.98 | 581 / 605 |
pancreas | 95% | 343.47 | 312 / 328 | 97% | 5.98 | 173 / 178 |
esophagus | 98% | 709.97 | 1410 / 1445 | 90% | 4.40 | 165 / 183 |
kidney | 99% | 421.66 | 88 / 89 | 87% | 3.40 | 781 / 901 |
uterus | 91% | 368.84 | 155 / 170 | 86% | 5.09 | 394 / 459 |
bladder | 100% | 482.24 | 21 / 21 | 72% | 2.40 | 363 / 504 |
stomach | 96% | 405.44 | 345 / 359 | 65% | 1.82 | 185 / 286 |
intestine | 94% | 338.67 | 912 / 966 | 54% | 1.52 | 285 / 527 |
brain | 50% | 131.10 | 1333 / 2642 | 80% | 2.72 | 563 / 705 |
skin | 71% | 330.11 | 1276 / 1809 | 55% | 1.26 | 261 / 472 |
adrenal gland | 88% | 252.45 | 228 / 258 | 37% | 0.72 | 84 / 230 |
liver | 48% | 94.80 | 109 / 226 | 52% | 2.02 | 212 / 406 |
spleen | 99% | 979.11 | 239 / 241 | 0% | 0 | 0 / 0 |
adipose | 96% | 484.89 | 1154 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 7.16 | 43 / 45 |
blood vessel | 88% | 297.77 | 1174 / 1335 | 0% | 0 | 0 / 0 |
heart | 82% | 234.42 | 707 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 78% | 4091.74 | 722 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 62% | 1.56 | 18 / 29 |
eye | 0% | 0 | 0 / 0 | 34% | 0.51 | 27 / 80 |
muscle | 19% | 30.55 | 149 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0034146 | Biological process | toll-like receptor 5 signaling pathway |
GO_0002224 | Biological process | toll-like receptor signaling pathway |
GO_0006954 | Biological process | inflammatory response |
GO_0071260 | Biological process | cellular response to mechanical stimulus |
GO_0032757 | Biological process | positive regulation of interleukin-8 production |
GO_0045087 | Biological process | innate immune response |
GO_0005886 | Cellular component | plasma membrane |
GO_0004888 | Molecular function | transmembrane signaling receptor activity |
GO_0038023 | Molecular function | signaling receptor activity |
GO_0038187 | Molecular function | pattern recognition receptor activity |
GO_0005515 | Molecular function | protein binding |
GO_0005149 | Molecular function | interleukin-1 receptor binding |
Gene name | TLR5 |
Protein name | Toll-like receptor 5 (Toll/interleukin-1 receptor-like protein 3) Toll like receptor 5 Toll-like receptor 5 |
Synonyms | TIL3 |
Description | FUNCTION: Pattern recognition receptor (PRR) located on the cell surface that participates in the activation of innate immunity and inflammatory response . Recognizes small molecular motifs named pathogen-associated molecular pattern (PAMPs) expressed by pathogens and microbe-associated molecular patterns (MAMPs) usually expressed by resident microbiota . Upon ligand binding such as bacterial flagellins, recruits intracellular adapter proteins MYD88 and TRIF leading to NF-kappa-B activation, cytokine secretion and induction of the inflammatory response . Plays thereby an important role in the relationship between the intestinal epithelium and enteric microbes and contributes to the gut microbiota composition throughout life (By similarity). . |
Accessions | B9VJ69 B9VJ68 ENST00000407096.6 ENST00000540964.5 D1CS84 D1CS82 B1AZ06 D1CS83 B9VJ70 D1CS90 D1CS89 B9VJ77 B9VJ65 B9VJ73 D1CS87 D1CS88 A0A2R8Y7Z4 A0A2R8Y4Q2 D1CS79 B9VJ75 B9VJ72 O60602 ENST00000645434.1 ENST00000642603.2 D1CS85 B9VJ61 |