Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell of lymphatic vessel | 28 studies | 75% ± 26% | |
ciliated cell | 14 studies | 42% ± 15% | |
goblet cell | 14 studies | 85% ± 24% | |
epithelial cell | 9 studies | 36% ± 15% | |
club cell | 7 studies | 37% ± 18% | |
enterocyte | 7 studies | 40% ± 24% | |
progenitor cell | 7 studies | 48% ± 29% | |
ionocyte | 5 studies | 63% ± 15% | |
respiratory goblet cell | 5 studies | 40% ± 19% | |
secretory cell | 5 studies | 39% ± 23% | |
enteroendocrine cell | 5 studies | 52% ± 28% | |
neuroendocrine cell | 5 studies | 76% ± 28% | |
intestinal crypt stem cell | 4 studies | 63% ± 23% | |
paneth cell | 4 studies | 96% ± 3% | |
transit amplifying cell | 4 studies | 67% ± 24% | |
brush cell | 4 studies | 67% ± 10% | |
basal cell | 4 studies | 27% ± 7% | |
mucus secreting cell | 4 studies | 74% ± 25% | |
luminal hormone-sensing cell of mammary gland | 4 studies | 46% ± 13% | |
deuterosomal cell | 3 studies | 39% ± 4% | |
pancreatic A cell | 3 studies | 23% ± 5% | |
type B pancreatic cell | 3 studies | 36% ± 15% | |
endothelial cell | 3 studies | 20% ± 1% | |
abnormal cell | 3 studies | 38% ± 14% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
intestine | 94% | 13032.84 | 911 / 966 | 86% | 1867.85 | 451 / 527 |
breast | 74% | 992.02 | 341 / 459 | 65% | 804.61 | 731 / 1118 |
prostate | 78% | 776.49 | 190 / 245 | 59% | 836.75 | 295 / 502 |
thymus | 100% | 32926.26 | 652 / 653 | 25% | 238.92 | 154 / 605 |
lung | 89% | 642.71 | 515 / 578 | 26% | 197.58 | 303 / 1155 |
stomach | 40% | 162.35 | 144 / 359 | 69% | 1054.11 | 197 / 286 |
spleen | 100% | 1629.82 | 240 / 241 | 0% | 0 | 0 / 0 |
esophagus | 72% | 530.66 | 1046 / 1445 | 26% | 99.47 | 47 / 183 |
bladder | 57% | 173.67 | 12 / 21 | 29% | 727.17 | 148 / 504 |
pancreas | 29% | 160.02 | 94 / 328 | 57% | 785.80 | 102 / 178 |
adrenal gland | 78% | 328.61 | 202 / 258 | 0% | 0 | 0 / 230 |
adipose | 68% | 504.91 | 817 / 1204 | 0% | 0 | 0 / 0 |
skin | 55% | 256.29 | 996 / 1809 | 1% | 2.21 | 6 / 472 |
uterus | 38% | 277.90 | 65 / 170 | 15% | 353.32 | 69 / 459 |
ovary | 44% | 163.73 | 80 / 180 | 5% | 26.45 | 22 / 430 |
kidney | 40% | 129.96 | 36 / 89 | 0% | 2.22 | 4 / 901 |
peripheral blood | 22% | 85.50 | 201 / 929 | 0% | 0 | 0 / 0 |
heart | 17% | 43.77 | 145 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 15% | 68.85 | 204 / 1335 | 0% | 0 | 0 / 0 |
liver | 8% | 25.12 | 17 / 226 | 4% | 17.25 | 16 / 406 |
muscle | 2% | 7.65 | 18 / 803 | 0% | 0 | 0 / 0 |
brain | 0% | 1.34 | 12 / 2642 | 0% | 0.25 | 1 / 705 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0010906 | Biological process | regulation of glucose metabolic process |
GO_0030277 | Biological process | maintenance of gastrointestinal epithelium |
GO_0005615 | Cellular component | extracellular space |
GO_0030141 | Cellular component | secretory granule |
GO_0005576 | Cellular component | extracellular region |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
GO_0003674 | Molecular function | molecular_function |
Gene name | TFF3 |
Protein name | Trefoil factor 3 Trefoil factor 3 (Intestinal trefoil factor) (hITF) (Polypeptide P1.B) (hP1.B) |
Synonyms | TFI ITF |
Description | FUNCTION: Involved in the maintenance and repair of the intestinal mucosa. Promotes the mobility of epithelial cells in healing processes (motogen). . |
Accessions | Q07654 ENST00000398431.2 ENST00000518498.3 H7BYT0 |