Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 1635.30 | 459 / 459 | 100% | 50.69 | 1118 / 1118 |
esophagus | 100% | 1614.13 | 1445 / 1445 | 100% | 30.83 | 183 / 183 |
liver | 100% | 1008.61 | 226 / 226 | 100% | 32.71 | 406 / 406 |
lung | 100% | 1782.44 | 578 / 578 | 100% | 42.17 | 1155 / 1155 |
ovary | 100% | 1818.88 | 180 / 180 | 100% | 39.71 | 430 / 430 |
prostate | 100% | 1913.12 | 245 / 245 | 100% | 35.66 | 502 / 502 |
thymus | 100% | 1832.56 | 653 / 653 | 100% | 36.75 | 605 / 605 |
uterus | 100% | 1717.65 | 170 / 170 | 100% | 58.36 | 459 / 459 |
bladder | 100% | 1720.19 | 21 / 21 | 100% | 42.18 | 503 / 504 |
brain | 100% | 1258.19 | 2635 / 2642 | 100% | 38.43 | 705 / 705 |
intestine | 100% | 1838.26 | 966 / 966 | 100% | 34.84 | 525 / 527 |
pancreas | 100% | 1031.43 | 328 / 328 | 99% | 37.34 | 177 / 178 |
skin | 100% | 1758.48 | 1809 / 1809 | 99% | 48.56 | 469 / 472 |
stomach | 100% | 1338.97 | 359 / 359 | 99% | 29.76 | 284 / 286 |
adrenal gland | 100% | 1769.40 | 258 / 258 | 99% | 25.54 | 228 / 230 |
kidney | 100% | 1450.38 | 89 / 89 | 99% | 31.17 | 892 / 901 |
adipose | 100% | 1582.37 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 51.98 | 29 / 29 |
spleen | 100% | 2350.00 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 45.79 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 74.40 | 1 / 1 |
blood vessel | 100% | 1442.34 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 100% | 1130.75 | 860 / 861 | 0% | 0 | 0 / 0 |
muscle | 100% | 1226.47 | 801 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 98% | 34.17 | 78 / 80 |
peripheral blood | 89% | 967.10 | 831 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0051123 | Biological process | RNA polymerase II preinitiation complex assembly |
GO_0006366 | Biological process | transcription by RNA polymerase II |
GO_0060261 | Biological process | positive regulation of transcription initiation by RNA polymerase II |
GO_0006367 | Biological process | transcription initiation at RNA polymerase II promoter |
GO_0043923 | Biological process | positive regulation by host of viral transcription |
GO_0042789 | Biological process | mRNA transcription by RNA polymerase II |
GO_0005669 | Cellular component | transcription factor TFIID complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0005634 | Cellular component | nucleus |
GO_0046982 | Molecular function | protein heterodimerization activity |
GO_0046966 | Molecular function | nuclear thyroid hormone receptor binding |
GO_0017025 | Molecular function | TBP-class protein binding |
GO_0016251 | Molecular function | RNA polymerase II general transcription initiation factor activity |
GO_0003713 | Molecular function | transcription coactivator activity |
GO_0042809 | Molecular function | nuclear vitamin D receptor binding |
GO_0005515 | Molecular function | protein binding |
Gene name | TAF11 |
Protein name | Transcription initiation factor TFIID subunit 11 (TFIID subunit p30-beta) (Transcription initiation factor TFIID 28 kDa subunit) (TAF(II)28) (TAFII-28) (TAFII28) TATA-box binding protein associated factor 11 |
Synonyms | PRO2134 TAF2I |
Description | FUNCTION: The TFIID basal transcription factor complex plays a major role in the initiation of RNA polymerase II (Pol II)-dependent transcription . TFIID recognizes and binds promoters with or without a TATA box via its subunit TBP, a TATA-box-binding protein, and promotes assembly of the pre-initiation complex (PIC) . The TFIID complex consists of TBP and TBP-associated factors (TAFs), including TAF1, TAF2, TAF3, TAF4, TAF5, TAF6, TAF7, TAF8, TAF9, TAF10, TAF11, TAF12 and TAF13 . TAF11, together with TAF13 and TBP, play key roles during promoter binding by the TFIID and TFIIA transcription factor complexes . . |
Accessions | A0A8I5KXE9 ENST00000361288.9 [Q15544-1] A0A3B3ITY8 A0A8I5KXB1 ENST00000420584.3 [Q15544-2] ENST00000688059.1 A0A8I5QJJ3 Q15544 ENST00000686190.1 ENST00000693593.1 ENST00000650109.1 |