Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 5 studies | 26% ± 8% | |
retinal bipolar neuron | 4 studies | 18% ± 2% | |
glutamatergic neuron | 4 studies | 28% ± 9% | |
rod bipolar cell | 3 studies | 24% ± 3% | |
GABAergic neuron | 3 studies | 28% ± 9% | |
oligodendrocyte | 3 studies | 25% ± 4% | |
oligodendrocyte precursor cell | 3 studies | 28% ± 4% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 25% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2527.03 | 1445 / 1445 | 100% | 20.23 | 183 / 183 |
skin | 100% | 2389.47 | 1809 / 1809 | 100% | 39.02 | 472 / 472 |
thymus | 100% | 2320.85 | 653 / 653 | 100% | 30.31 | 605 / 605 |
brain | 100% | 2522.41 | 2640 / 2642 | 100% | 51.10 | 705 / 705 |
uterus | 100% | 3014.59 | 170 / 170 | 100% | 27.89 | 458 / 459 |
prostate | 100% | 2833.40 | 245 / 245 | 100% | 35.35 | 500 / 502 |
kidney | 100% | 1787.34 | 89 / 89 | 100% | 25.94 | 897 / 901 |
ovary | 100% | 3147.37 | 180 / 180 | 100% | 16.84 | 428 / 430 |
breast | 100% | 2191.39 | 459 / 459 | 99% | 27.81 | 1112 / 1118 |
pancreas | 99% | 1375.24 | 326 / 328 | 100% | 23.93 | 178 / 178 |
stomach | 100% | 1880.65 | 359 / 359 | 99% | 21.40 | 284 / 286 |
intestine | 100% | 2559.68 | 966 / 966 | 99% | 22.32 | 523 / 527 |
lung | 100% | 1844.52 | 576 / 578 | 99% | 24.70 | 1148 / 1155 |
liver | 100% | 1359.14 | 226 / 226 | 99% | 20.60 | 402 / 406 |
bladder | 100% | 2854.10 | 21 / 21 | 99% | 25.74 | 499 / 504 |
adrenal gland | 100% | 2262.41 | 258 / 258 | 97% | 15.66 | 224 / 230 |
adipose | 100% | 1940.03 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2306.87 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 42.86 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 30.34 | 29 / 29 |
spleen | 100% | 2541.15 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 28.94 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 18.59 | 1 / 1 |
muscle | 100% | 1643.61 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 100% | 1549.65 | 857 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 93% | 1189.97 | 862 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0030324 | Biological process | lung development |
GO_0035904 | Biological process | aorta development |
GO_0006470 | Biological process | protein dephosphorylation |
GO_0001701 | Biological process | in utero embryonic development |
GO_0141111 | Biological process | positive regulation of cGAS/STING signaling pathway |
GO_0060976 | Biological process | coronary vasculature development |
GO_0043410 | Biological process | positive regulation of MAPK cascade |
GO_0003279 | Biological process | cardiac septum development |
GO_0038061 | Biological process | non-canonical NF-kappaB signal transduction |
GO_0007179 | Biological process | transforming growth factor beta receptor signaling pathway |
GO_0071902 | Biological process | positive regulation of protein serine/threonine kinase activity |
GO_0003007 | Biological process | heart morphogenesis |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0016607 | Cellular component | nuclear speck |
GO_0032991 | Cellular component | protein-containing complex |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0010008 | Cellular component | endosome membrane |
GO_0060090 | Molecular function | molecular adaptor activity |
GO_0048273 | Molecular function | mitogen-activated protein kinase p38 binding |
GO_0044877 | Molecular function | protein-containing complex binding |
GO_0043539 | Molecular function | protein serine/threonine kinase activator activity |
GO_0004722 | Molecular function | protein serine/threonine phosphatase activity |
GO_0005515 | Molecular function | protein binding |
Gene name | TAB1 |
Protein name | TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 (Mitogen-activated protein kinase kinase kinase 7-interacting protein 1) (TGF-beta-activated kinase 1-binding protein 1) (TAK1-binding protein 1) |
Synonyms | MAP3K7IP1 |
Description | FUNCTION: Key adapter protein that plays an essential role in JNK and NF-kappa-B activation and proinflammatory cytokines production in response to stimulation with TLRs and cytokines . Mechanistically, associates with the catalytic domain of MAP3K7/TAK1 to trigger MAP3K7/TAK1 autophosphorylation leading to its full activation . Similarly, associates with MAPK14 and triggers its autophosphorylation and subsequent activation . In turn, MAPK14 phosphorylates TAB1 and inhibits MAP3K7/TAK1 activation in a feedback control mechanism . Plays also a role in recruiting MAPK14 to the TAK1 complex for the phosphorylation of the TAB2 and TAB3 regulatory subunits . . |
Accessions | ENST00000331454.3 [Q15750-2] Q15750 ENST00000216160.11 [Q15750-1] |