Name | Number of supported studies | Average coverage | |
---|---|---|---|
B cell | 35 studies | 38% ± 11% | |
macrophage | 34 studies | 32% ± 16% | |
naive B cell | 20 studies | 36% ± 9% | |
memory B cell | 19 studies | 28% ± 7% | |
conventional dendritic cell | 16 studies | 28% ± 13% | |
plasmacytoid dendritic cell | 16 studies | 36% ± 13% | |
non-classical monocyte | 16 studies | 26% ± 10% | |
endothelial cell of lymphatic vessel | 15 studies | 31% ± 11% | |
monocyte | 15 studies | 25% ± 11% | |
classical monocyte | 14 studies | 23% ± 9% | |
endothelial cell | 14 studies | 28% ± 10% | |
microglial cell | 13 studies | 46% ± 18% | |
type I pneumocyte | 11 studies | 25% ± 10% | |
dendritic cell | 11 studies | 35% ± 18% | |
myeloid cell | 11 studies | 37% ± 14% | |
ciliated cell | 11 studies | 26% ± 8% | |
oligodendrocyte | 10 studies | 27% ± 10% | |
GABAergic neuron | 9 studies | 37% ± 20% | |
glutamatergic neuron | 8 studies | 43% ± 24% | |
fibroblast | 8 studies | 19% ± 4% | |
astrocyte | 7 studies | 28% ± 11% | |
epithelial cell of proximal tubule | 6 studies | 20% ± 3% | |
neuron | 6 studies | 34% ± 13% | |
interneuron | 6 studies | 39% ± 21% | |
precursor B cell | 6 studies | 36% ± 11% | |
alveolar macrophage | 6 studies | 32% ± 16% | |
adipocyte | 6 studies | 26% ± 7% | |
epithelial cell | 5 studies | 40% ± 13% | |
abnormal cell | 5 studies | 28% ± 12% | |
oligodendrocyte precursor cell | 5 studies | 29% ± 12% | |
leukocyte | 4 studies | 31% ± 18% | |
retinal ganglion cell | 4 studies | 43% ± 23% | |
immature B cell | 4 studies | 43% ± 9% | |
mononuclear phagocyte | 4 studies | 38% ± 10% | |
goblet cell | 4 studies | 27% ± 14% | |
melanocyte | 4 studies | 41% ± 23% | |
GABAergic interneuron | 3 studies | 25% ± 6% | |
glial cell | 3 studies | 20% ± 3% | |
plasma cell | 3 studies | 32% ± 5% | |
amacrine cell | 3 studies | 37% ± 3% | |
tissue-resident macrophage | 3 studies | 28% ± 11% | |
germinal center B cell | 3 studies | 44% ± 7% | |
intermediate monocyte | 3 studies | 30% ± 11% | |
lymphocyte | 3 studies | 22% ± 3% | |
enterocyte | 3 studies | 20% ± 4% | |
basal cell | 3 studies | 43% ± 13% | |
pericyte | 3 studies | 18% ± 1% | |
smooth muscle cell | 3 studies | 16% ± 1% | |
platelet | 3 studies | 18% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 4666.65 | 1445 / 1445 | 100% | 12.05 | 183 / 183 |
brain | 100% | 4875.86 | 2640 / 2642 | 100% | 17.81 | 705 / 705 |
lung | 100% | 5509.94 | 578 / 578 | 100% | 11.91 | 1152 / 1155 |
kidney | 100% | 5066.65 | 89 / 89 | 100% | 20.41 | 897 / 901 |
skin | 100% | 4071.08 | 1808 / 1809 | 100% | 37.32 | 470 / 472 |
prostate | 100% | 3569.04 | 245 / 245 | 99% | 9.58 | 499 / 502 |
breast | 100% | 5027.13 | 459 / 459 | 99% | 13.69 | 1111 / 1118 |
intestine | 100% | 5229.78 | 966 / 966 | 99% | 12.54 | 523 / 527 |
thymus | 100% | 4991.41 | 653 / 653 | 99% | 14.56 | 600 / 605 |
stomach | 100% | 3036.97 | 359 / 359 | 99% | 12.90 | 282 / 286 |
uterus | 100% | 5255.16 | 170 / 170 | 98% | 9.83 | 452 / 459 |
bladder | 100% | 4435.95 | 21 / 21 | 98% | 10.48 | 496 / 504 |
ovary | 100% | 4409.14 | 180 / 180 | 98% | 8.14 | 420 / 430 |
adrenal gland | 100% | 2664.78 | 257 / 258 | 95% | 8.85 | 219 / 230 |
pancreas | 95% | 1585.87 | 310 / 328 | 99% | 15.09 | 176 / 178 |
liver | 91% | 1299.39 | 205 / 226 | 75% | 5.31 | 305 / 406 |
adipose | 100% | 6004.64 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 6547.23 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 35.16 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 23.97 | 29 / 29 |
spleen | 100% | 7280.46 | 241 / 241 | 0% | 0 | 0 / 0 |
heart | 96% | 2664.29 | 829 / 861 | 0% | 0 | 0 / 0 |
muscle | 96% | 1788.78 | 772 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 8.92 | 43 / 45 |
peripheral blood | 94% | 4337.73 | 870 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0070925 | Biological process | organelle assembly |
GO_0006886 | Biological process | intracellular protein transport |
GO_0001916 | Biological process | positive regulation of T cell mediated cytotoxicity |
GO_1902685 | Biological process | positive regulation of receptor localization to synapse |
GO_0051640 | Biological process | organelle localization |
GO_0048278 | Biological process | vesicle docking |
GO_0006906 | Biological process | vesicle fusion |
GO_1903076 | Biological process | regulation of protein localization to plasma membrane |
GO_0001772 | Cellular component | immunological synapse |
GO_0005886 | Cellular component | plasma membrane |
GO_0030139 | Cellular component | endocytic vesicle |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0012505 | Cellular component | endomembrane system |
GO_0055037 | Cellular component | recycling endosome |
GO_0005769 | Cellular component | early endosome |
GO_0031901 | Cellular component | early endosome membrane |
GO_0005764 | Cellular component | lysosome |
GO_0070062 | Cellular component | extracellular exosome |
GO_0070820 | Cellular component | tertiary granule |
GO_0042582 | Cellular component | azurophil granule |
GO_0008021 | Cellular component | synaptic vesicle |
GO_0005770 | Cellular component | late endosome |
GO_0005768 | Cellular component | endosome |
GO_0031982 | Cellular component | vesicle |
GO_0031201 | Cellular component | SNARE complex |
GO_0005765 | Cellular component | lysosomal membrane |
GO_0000149 | Molecular function | SNARE binding |
GO_0019869 | Molecular function | chloride channel inhibitor activity |
GO_0005484 | Molecular function | SNAP receptor activity |
GO_0005515 | Molecular function | protein binding |
GO_0019905 | Molecular function | syntaxin binding |
Gene name | STX7 |
Protein name | Syntaxin-7 |
Synonyms | |
Description | FUNCTION: May be involved in protein trafficking from the plasma membrane to the early endosome (EE) as well as in homotypic fusion of endocytic organelles. Mediates the endocytic trafficking from early endosomes to late endosomes and lysosomes. |
Accessions | ENST00000367937.4 [O15400-2] O15400 ENST00000367941.7 [O15400-1] |