Name | Number of supported studies | Average coverage | |
---|---|---|---|
mast cell | 25 studies | 37% ± 18% | |
endothelial cell | 13 studies | 21% ± 5% | |
type I pneumocyte | 9 studies | 24% ± 6% | |
retinal cone cell | 9 studies | 54% ± 24% | |
retinal rod cell | 9 studies | 47% ± 17% | |
epithelial cell | 6 studies | 34% ± 14% | |
neutrophil | 5 studies | 23% ± 4% | |
amacrine cell | 5 studies | 24% ± 8% | |
retinal bipolar neuron | 5 studies | 52% ± 25% | |
ON-bipolar cell | 4 studies | 42% ± 17% | |
classical monocyte | 3 studies | 25% ± 2% | |
hematopoietic precursor cell | 3 studies | 17% ± 3% | |
retinal ganglion cell | 3 studies | 33% ± 12% | |
OFF-bipolar cell | 3 studies | 46% ± 12% | |
retina horizontal cell | 3 studies | 20% ± 3% | |
rod bipolar cell | 3 studies | 67% ± 11% | |
GABAergic neuron | 3 studies | 46% ± 1% | |
glutamatergic neuron | 3 studies | 57% ± 8% | |
pancreatic A cell | 3 studies | 31% ± 3% | |
pancreatic ductal cell | 3 studies | 43% ± 8% | |
enteroendocrine cell | 3 studies | 20% ± 5% | |
goblet cell | 3 studies | 26% ± 13% | |
endothelial cell of lymphatic vessel | 3 studies | 20% ± 6% | |
macrophage | 3 studies | 16% ± 1% | |
basal cell | 3 studies | 22% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 100% | 5856.25 | 578 / 578 | 100% | 24.78 | 1154 / 1155 |
kidney | 100% | 5461.73 | 89 / 89 | 100% | 35.39 | 900 / 901 |
breast | 100% | 2301.76 | 459 / 459 | 100% | 26.59 | 1113 / 1118 |
esophagus | 100% | 2006.14 | 1445 / 1445 | 99% | 25.60 | 182 / 183 |
intestine | 100% | 2988.17 | 966 / 966 | 99% | 39.78 | 524 / 527 |
prostate | 100% | 2778.34 | 245 / 245 | 99% | 20.54 | 499 / 502 |
stomach | 100% | 2949.85 | 359 / 359 | 99% | 35.97 | 284 / 286 |
skin | 100% | 2461.16 | 1809 / 1809 | 99% | 41.13 | 468 / 472 |
ovary | 100% | 2372.50 | 180 / 180 | 99% | 16.57 | 426 / 430 |
bladder | 100% | 2292.57 | 21 / 21 | 99% | 31.49 | 499 / 504 |
pancreas | 100% | 1835.46 | 328 / 328 | 99% | 24.07 | 176 / 178 |
uterus | 100% | 3029.01 | 170 / 170 | 97% | 19.36 | 445 / 459 |
thymus | 100% | 2671.65 | 653 / 653 | 93% | 21.07 | 562 / 605 |
adrenal gland | 100% | 3017.76 | 258 / 258 | 90% | 12.71 | 206 / 230 |
brain | 95% | 1543.57 | 2523 / 2642 | 54% | 4.71 | 380 / 705 |
liver | 74% | 612.42 | 167 / 226 | 51% | 7.47 | 207 / 406 |
adipose | 100% | 2187.84 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 3476.54 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 11.45 | 1 / 1 |
blood vessel | 100% | 1843.24 | 1331 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 1280.72 | 855 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 95% | 21.86 | 76 / 80 |
tonsil | 0% | 0 | 0 / 0 | 93% | 11.78 | 42 / 45 |
muscle | 86% | 859.30 | 688 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 83% | 7089.18 | 774 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 45% | 3.38 | 13 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0010468 | Biological process | regulation of gene expression |
GO_0050921 | Biological process | positive regulation of chemotaxis |
GO_0031175 | Biological process | neuron projection development |
GO_0006886 | Biological process | intracellular protein transport |
GO_0045785 | Biological process | positive regulation of cell adhesion |
GO_0060291 | Biological process | long-term synaptic potentiation |
GO_0098967 | Biological process | exocytic insertion of neurotransmitter receptor to postsynaptic membrane |
GO_2000010 | Biological process | positive regulation of protein localization to cell surface |
GO_1903078 | Biological process | positive regulation of protein localization to plasma membrane |
GO_0048278 | Biological process | vesicle docking |
GO_0008284 | Biological process | positive regulation of cell population proliferation |
GO_0090174 | Biological process | organelle membrane fusion |
GO_0031629 | Biological process | synaptic vesicle fusion to presynaptic active zone membrane |
GO_0016324 | Cellular component | apical plasma membrane |
GO_0098978 | Cellular component | glutamatergic synapse |
GO_0098793 | Cellular component | presynapse |
GO_0098685 | Cellular component | Schaffer collateral - CA1 synapse |
GO_0005886 | Cellular component | plasma membrane |
GO_0001750 | Cellular component | photoreceptor outer segment |
GO_0012505 | Cellular component | endomembrane system |
GO_0005773 | Cellular component | vacuole |
GO_0048787 | Cellular component | presynaptic active zone membrane |
GO_0070062 | Cellular component | extracellular exosome |
GO_0001917 | Cellular component | photoreceptor inner segment |
GO_0098794 | Cellular component | postsynapse |
GO_0042581 | Cellular component | specific granule |
GO_0043005 | Cellular component | neuron projection |
GO_0030425 | Cellular component | dendrite |
GO_0005911 | Cellular component | cell-cell junction |
GO_0042582 | Cellular component | azurophil granule |
GO_0008021 | Cellular component | synaptic vesicle |
GO_0030426 | Cellular component | growth cone |
GO_0042589 | Cellular component | zymogen granule membrane |
GO_0030027 | Cellular component | lamellipodium |
GO_0042470 | Cellular component | melanosome |
GO_0031201 | Cellular component | SNARE complex |
GO_0005634 | Cellular component | nucleus |
GO_0000149 | Molecular function | SNARE binding |
GO_0050544 | Molecular function | arachidonic acid binding |
GO_0005484 | Molecular function | SNAP receptor activity |
GO_0005515 | Molecular function | protein binding |
Gene name | STX3 |
Protein name | Syntaxin 3 Syntaxin-3 |
Synonyms | STX3A |
Description | FUNCTION: Potentially involved in docking of synaptic vesicles at presynaptic active zones. Apical receptor involved in membrane fusion of apical vesicles. .; FUNCTION: [Isoform B]: Essential for survival of retinal photoreceetors. .; FUNCTION: [Isoform 3]: Functions as a regulator of gene expression. . |
Accessions | A0A0J9YW33 ENST00000528805.1 E9PQJ8 ENST00000533637.5 ENST00000530221.1 E9PN33 ENST00000337979.9 [Q13277-1] ENST00000641815.1 A0A286YF28 ENST00000633708.1 A0A0C4DGE4 ENST00000529177.5 [Q13277-3] Q13277 |