STX10 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
classical monocyte	20 studies	30% ± 14%	Explore
non-classical monocyte	14 studies	32% ± 17%	Explore
monocyte	8 studies	27% ± 8%	Explore
conventional dendritic cell	7 studies	31% ± 17%	Explore
B cell	7 studies	19% ± 4%	Explore
CD8-positive, alpha-beta T cell	7 studies	19% ± 3%	Explore
regulatory T cell	6 studies	17% ± 1%	Explore
CD16-negative, CD56-bright natural killer cell, human	5 studies	17% ± 2%	Explore
CD16-positive, CD56-dim natural killer cell, human	5 studies	18% ± 2%	Explore
CD4-positive, alpha-beta T cell	5 studies	18% ± 3%	Explore
dendritic cell	5 studies	33% ± 19%	Explore
endothelial cell	5 studies	29% ± 10%	Explore
myofibroblast cell	5 studies	17% ± 2%	Explore
epithelial cell	5 studies	37% ± 14%	Explore
fibroblast	5 studies	22% ± 6%	Explore
natural killer cell	5 studies	21% ± 3%	Explore
macrophage	5 studies	21% ± 6%	Explore
effector memory CD8-positive, alpha-beta T cell	4 studies	18% ± 2%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	4 studies	19% ± 4%	Explore
pericyte	4 studies	20% ± 6%	Explore
abnormal cell	4 studies	19% ± 4%	Explore
squamous epithelial cell	3 studies	34% ± 24%	Explore
exhausted T cell	3 studies	22% ± 6%	Explore
hematopoietic precursor cell	3 studies	29% ± 8%	Explore
mature NK T cell	3 studies	16% ± 0%	Explore
ciliated cell	3 studies	32% ± 3%	Explore
effector CD8-positive, alpha-beta T cell	3 studies	18% ± 1%	Explore
connective tissue cell	3 studies	27% ± 8%	Explore
plasmacytoid dendritic cell	3 studies	18% ± 2%	Explore
CD4-positive, alpha-beta memory T cell	3 studies	18% ± 0%	Explore
gamma-delta T cell	3 studies	26% ± 14%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	10 studies	23% ± 6%	Explore
lung	5 studies	25% ± 9%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	2551.53	1445 / 1445	100%	50.42	183 / 183
ovary	100%	2323.86	180 / 180	100%	84.47	430 / 430
skin	100%	2861.51	1809 / 1809	100%	90.57	472 / 472
thymus	100%	2913.90	653 / 653	100%	63.46	605 / 605
uterus	100%	2789.97	170 / 170	100%	101.84	459 / 459
brain	100%	1897.75	2637 / 2642	100%	87.19	705 / 705
liver	100%	1995.22	226 / 226	100%	64.38	405 / 406
pancreas	100%	1294.58	327 / 328	100%	75.84	178 / 178
lung	100%	3361.17	578 / 578	100%	71.24	1151 / 1155
stomach	100%	2214.05	359 / 359	100%	70.14	285 / 286
intestine	100%	2681.99	966 / 966	100%	84.02	525 / 527
adrenal gland	100%	2678.27	258 / 258	100%	58.81	229 / 230
kidney	100%	2587.02	89 / 89	99%	56.24	895 / 901
breast	100%	2383.00	459 / 459	99%	71.90	1110 / 1118
prostate	100%	2528.82	245 / 245	99%	56.81	498 / 502
bladder	100%	2484.24	21 / 21	99%	91.11	499 / 504
adipose	100%	2188.89	1204 / 1204	0%	0	0 / 0
eye	0%	0	0 / 0	100%	72.91	80 / 80
lymph node	0%	0	0 / 0	100%	102.93	29 / 29
spleen	100%	4120.28	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	86.30	45 / 45
ureter	0%	0	0 / 0	100%	103.36	1 / 1
peripheral blood	100%	5730.36	927 / 929	0%	0	0 / 0
blood vessel	100%	1972.54	1332 / 1335	0%	0	0 / 0
heart	99%	1517.09	854 / 861	0%	0	0 / 0
muscle	96%	978.60	772 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0