SELENOP report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
fibroblast	42 studies	58% ± 25%	Explore
macrophage	37 studies	56% ± 23%	Explore
endothelial cell	37 studies	42% ± 16%	Explore
pericyte	27 studies	38% ± 16%	Explore
endothelial cell of lymphatic vessel	22 studies	58% ± 20%	Explore
basal cell	19 studies	34% ± 13%	Explore
smooth muscle cell	18 studies	35% ± 14%	Explore
connective tissue cell	18 studies	57% ± 20%	Explore
epithelial cell	17 studies	42% ± 23%	Explore
oligodendrocyte	16 studies	51% ± 18%	Explore
capillary endothelial cell	13 studies	35% ± 13%	Explore
myofibroblast cell	12 studies	48% ± 20%	Explore
vein endothelial cell	12 studies	30% ± 12%	Explore
secretory cell	11 studies	29% ± 11%	Explore
mesothelial cell	11 studies	50% ± 20%	Explore
myeloid cell	10 studies	33% ± 16%	Explore
type II pneumocyte	9 studies	61% ± 25%	Explore
endothelial cell of artery	9 studies	28% ± 10%	Explore
enterocyte	9 studies	61% ± 26%	Explore
endothelial cell of vascular tree	9 studies	37% ± 13%	Explore
type I pneumocyte	8 studies	60% ± 13%	Explore
astrocyte	8 studies	34% ± 13%	Explore
club cell	7 studies	32% ± 11%	Explore
epithelial cell of proximal tubule	7 studies	61% ± 13%	Explore
goblet cell	7 studies	37% ± 15%	Explore
ciliated cell	7 studies	29% ± 12%	Explore
ionocyte	6 studies	31% ± 13%	Explore
mononuclear phagocyte	6 studies	41% ± 18%	Explore
kidney loop of Henle epithelial cell	6 studies	30% ± 7%	Explore
progenitor cell	6 studies	45% ± 18%	Explore
renal alpha-intercalated cell	6 studies	64% ± 10%	Explore
abnormal cell	6 studies	43% ± 19%	Explore
monocyte	6 studies	30% ± 14%	Explore
T cell	5 studies	28% ± 11%	Explore
kidney distal convoluted tubule epithelial cell	5 studies	45% ± 14%	Explore
glial cell	5 studies	46% ± 13%	Explore
hepatocyte	5 studies	79% ± 26%	Explore
glomerular endothelial cell	4 studies	61% ± 12%	Explore
podocyte	4 studies	81% ± 9%	Explore
enteroendocrine cell	4 studies	39% ± 4%	Explore
leukocyte	4 studies	32% ± 3%	Explore
conventional dendritic cell	4 studies	36% ± 25%	Explore
adventitial cell	4 studies	56% ± 26%	Explore
Mueller cell	4 studies	62% ± 25%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	49% ± 12%	Explore
dendritic cell	4 studies	39% ± 18%	Explore
luminal cell of prostate epithelium	4 studies	27% ± 3%	Explore
oligodendrocyte precursor cell	4 studies	37% ± 14%	Explore
microglial cell	3 studies	45% ± 14%	Explore
renal principal cell	3 studies	58% ± 3%	Explore
tissue-resident macrophage	3 studies	68% ± 16%	Explore
endothelial cell of sinusoid	3 studies	67% ± 26%	Explore
myoepithelial cell	3 studies	46% ± 8%	Explore
keratinocyte	3 studies	37% ± 5%	Explore
adipocyte	3 studies	47% ± 33%	Explore
progenitor cell of mammary luminal epithelium	3 studies	53% ± 13%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
lung	12 studies	34% ± 14%	Explore
intestine	12 studies	37% ± 16%	Explore
brain	9 studies	29% ± 12%	Explore
kidney	7 studies	41% ± 12%	Explore
uterus	6 studies	42% ± 15%	Explore
eye	4 studies	29% ± 12%	Explore
prostate	4 studies	30% ± 9%	Explore
breast	4 studies	42% ± 13%	Explore
liver	4 studies	44% ± 20%	Explore
ovary	3 studies	49% ± 20%	Explore
adipose	3 studies	34% ± 13%	Explore
esophagus	3 studies	34% ± 12%	Explore
heart	3 studies	16% ± 1%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
liver	100%	13152.60	226 / 226	99%	167.52	402 / 406
prostate	98%	2040.47	239 / 245	96%	39.41	483 / 502
breast	100%	6508.61	459 / 459	89%	32.84	991 / 1118
ovary	100%	6453.06	180 / 180	86%	23.88	371 / 430
kidney	100%	3735.37	89 / 89	86%	39.70	777 / 901
lung	100%	6970.80	578 / 578	83%	27.40	954 / 1155
thymus	99%	3075.02	646 / 653	76%	13.93	458 / 605
stomach	99%	2733.52	357 / 359	68%	20.32	195 / 286
intestine	96%	5187.68	928 / 966	70%	20.32	367 / 527
uterus	100%	3651.44	170 / 170	61%	18.44	282 / 459
pancreas	77%	1094.77	251 / 328	80%	17.18	142 / 178
adrenal gland	93%	4070.17	240 / 258	63%	13.78	145 / 230
brain	71%	2142.37	1879 / 2642	85%	23.24	598 / 705
esophagus	91%	1742.01	1309 / 1445	56%	11.85	102 / 183
bladder	86%	2281.05	18 / 21	53%	14.04	265 / 504
skin	87%	2148.56	1578 / 1809	37%	7.23	174 / 472
adipose	100%	7163.19	1204 / 1204	0%	0	0 / 0
spleen	99%	5520.85	238 / 241	0%	0	0 / 0
muscle	94%	1545.18	751 / 803	0%	0	0 / 0
blood vessel	88%	2193.41	1179 / 1335	0%	0	0 / 0
heart	79%	1414.80	679 / 861	0%	0	0 / 0
tonsil	0%	0	0 / 0	58%	18.89	26 / 45
eye	0%	0	0 / 0	55%	8.00	44 / 80
lymph node	0%	0	0 / 0	38%	5.02	11 / 29
peripheral blood	1%	19.11	10 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1