Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 17 studies | 31% ± 12% | |
astrocyte | 12 studies | 34% ± 17% | |
glutamatergic neuron | 11 studies | 52% ± 27% | |
microglial cell | 11 studies | 30% ± 11% | |
oligodendrocyte | 11 studies | 34% ± 12% | |
GABAergic neuron | 10 studies | 43% ± 24% | |
macrophage | 10 studies | 36% ± 15% | |
oligodendrocyte precursor cell | 10 studies | 33% ± 13% | |
adipocyte | 8 studies | 24% ± 6% | |
fibroblast | 8 studies | 27% ± 7% | |
neuron | 7 studies | 40% ± 21% | |
smooth muscle cell | 6 studies | 27% ± 6% | |
pericyte | 6 studies | 26% ± 5% | |
interneuron | 5 studies | 49% ± 24% | |
dendritic cell | 5 studies | 24% ± 6% | |
endothelial cell of lymphatic vessel | 5 studies | 30% ± 7% | |
epithelial cell | 4 studies | 26% ± 11% | |
granule cell | 4 studies | 31% ± 14% | |
retinal rod cell | 4 studies | 21% ± 4% | |
myeloid cell | 4 studies | 33% ± 8% | |
monocyte | 4 studies | 34% ± 7% | |
type I pneumocyte | 4 studies | 23% ± 6% | |
GABAergic interneuron | 3 studies | 40% ± 5% | |
cardiac muscle cell | 3 studies | 22% ± 1% | |
GABAergic amacrine cell | 3 studies | 27% ± 8% | |
amacrine cell | 3 studies | 26% ± 7% | |
retina horizontal cell | 3 studies | 27% ± 8% | |
retinal ganglion cell | 3 studies | 31% ± 14% | |
hepatocyte | 3 studies | 35% ± 17% | |
ependymal cell | 3 studies | 29% ± 15% | |
T cell | 3 studies | 18% ± 1% | |
lymphocyte | 3 studies | 22% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 1915.25 | 245 / 245 | 100% | 41.43 | 502 / 502 |
brain | 100% | 2078.48 | 2642 / 2642 | 100% | 22.48 | 704 / 705 |
breast | 100% | 1418.36 | 459 / 459 | 100% | 24.08 | 1115 / 1118 |
esophagus | 100% | 1485.91 | 1444 / 1445 | 99% | 17.88 | 182 / 183 |
lung | 100% | 1250.00 | 577 / 578 | 99% | 17.84 | 1147 / 1155 |
uterus | 100% | 1772.86 | 170 / 170 | 99% | 15.55 | 454 / 459 |
pancreas | 99% | 820.54 | 326 / 328 | 99% | 12.02 | 176 / 178 |
skin | 100% | 1408.32 | 1805 / 1809 | 97% | 21.17 | 458 / 472 |
ovary | 100% | 1512.84 | 180 / 180 | 97% | 11.90 | 415 / 430 |
thymus | 100% | 1097.53 | 652 / 653 | 96% | 9.71 | 581 / 605 |
bladder | 100% | 1967.57 | 21 / 21 | 96% | 12.26 | 482 / 504 |
stomach | 100% | 1278.09 | 359 / 359 | 94% | 10.45 | 270 / 286 |
adrenal gland | 100% | 1981.07 | 258 / 258 | 94% | 12.10 | 217 / 230 |
intestine | 100% | 1605.87 | 966 / 966 | 92% | 8.54 | 484 / 527 |
kidney | 100% | 885.24 | 89 / 89 | 89% | 9.27 | 799 / 901 |
liver | 100% | 796.50 | 226 / 226 | 87% | 9.17 | 353 / 406 |
adipose | 100% | 1614.14 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2246.58 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 1290.72 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 14.30 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 13.05 | 1 / 1 |
muscle | 100% | 1239.05 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 95% | 802.49 | 817 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 83% | 7.43 | 24 / 29 |
eye | 0% | 0 | 0 / 0 | 69% | 5.64 | 55 / 80 |
peripheral blood | 63% | 496.04 | 585 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007165 | Biological process | signal transduction |
GO_0005764 | Cellular component | lysosome |
GO_0005768 | Cellular component | endosome |
GO_0016020 | Cellular component | membrane |
GO_0005769 | Cellular component | early endosome |
GO_0004674 | Molecular function | protein serine/threonine kinase activity |
GO_0005515 | Molecular function | protein binding |
GO_0106310 | Molecular function | protein serine kinase activity |
GO_0035091 | Molecular function | phosphatidylinositol binding |
GO_0005524 | Molecular function | ATP binding |
Gene name | RPS6KC1 |
Protein name | non-specific serine/threonine protein kinase (EC 2.7.11.1) Ribosomal protein S6 kinase delta-1 (S6K-delta-1) (EC 2.7.11.1) (52 kDa ribosomal protein S6 kinase) (Ribosomal S6 kinase-like protein with two PSK domains 118 kDa protein) (SPHK1-binding protein) Ribosomal protein S6 kinase C1 |
Synonyms | RPK118 |
Description | FUNCTION: May be involved in transmitting sphingosine-1 phosphate (SPP)-mediated signaling into the cell . Plays a role in the recruitment of PRDX3 to early endosomes . . |
Accessions | F5H7T0 ENST00000615329.4 A0A087X1U5 ENST00000543470.5 ENST00000614059.4 ENST00000366959.4 [Q96S38-2] F6RJM5 ENST00000543354.5 Q96S38 ENST00000366960.8 [Q96S38-1] |