Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 38 studies | 40% ± 18% | |
pericyte | 22 studies | 29% ± 12% | |
basal cell | 18 studies | 37% ± 18% | |
endothelial cell | 16 studies | 23% ± 6% | |
smooth muscle cell | 15 studies | 31% ± 12% | |
epithelial cell | 13 studies | 38% ± 20% | |
connective tissue cell | 12 studies | 37% ± 14% | |
myofibroblast cell | 12 studies | 28% ± 13% | |
ciliated cell | 9 studies | 40% ± 21% | |
respiratory goblet cell | 6 studies | 26% ± 8% | |
secretory cell | 6 studies | 39% ± 10% | |
adipocyte | 5 studies | 32% ± 22% | |
goblet cell | 5 studies | 33% ± 19% | |
squamous epithelial cell | 4 studies | 54% ± 18% | |
abnormal cell | 4 studies | 24% ± 2% | |
adventitial cell | 4 studies | 26% ± 13% | |
alveolar macrophage | 4 studies | 25% ± 5% | |
keratinocyte | 4 studies | 51% ± 15% | |
glomerular endothelial cell | 3 studies | 35% ± 12% | |
club cell | 3 studies | 41% ± 23% | |
astrocyte | 3 studies | 25% ± 4% | |
GABAergic neuron | 3 studies | 31% ± 6% | |
enterocyte | 3 studies | 18% ± 2% | |
macrophage | 3 studies | 21% ± 5% | |
endothelial cell of vascular tree | 3 studies | 19% ± 4% | |
interneuron | 3 studies | 30% ± 12% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 5214.01 | 1444 / 1445 | 98% | 66.82 | 180 / 183 |
intestine | 100% | 2922.00 | 963 / 966 | 96% | 40.23 | 505 / 527 |
bladder | 100% | 3220.33 | 21 / 21 | 95% | 59.21 | 480 / 504 |
uterus | 96% | 2285.12 | 163 / 170 | 97% | 92.71 | 447 / 459 |
breast | 100% | 4711.69 | 459 / 459 | 92% | 47.55 | 1030 / 1118 |
lung | 99% | 3037.51 | 571 / 578 | 92% | 56.19 | 1066 / 1155 |
skin | 100% | 6784.38 | 1808 / 1809 | 87% | 57.04 | 411 / 472 |
prostate | 99% | 3595.76 | 243 / 245 | 81% | 26.09 | 406 / 502 |
liver | 100% | 3093.65 | 226 / 226 | 79% | 26.37 | 321 / 406 |
stomach | 86% | 2070.97 | 307 / 359 | 92% | 33.28 | 262 / 286 |
adrenal gland | 100% | 3462.49 | 258 / 258 | 55% | 19.12 | 126 / 230 |
ovary | 61% | 817.91 | 109 / 180 | 93% | 35.92 | 400 / 430 |
kidney | 53% | 857.00 | 47 / 89 | 92% | 40.46 | 832 / 901 |
thymus | 66% | 877.79 | 434 / 653 | 65% | 16.30 | 396 / 605 |
brain | 35% | 385.34 | 915 / 2642 | 83% | 32.98 | 583 / 705 |
pancreas | 9% | 88.38 | 31 / 328 | 96% | 49.44 | 170 / 178 |
adipose | 100% | 4444.51 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 3256.16 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 96.37 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 39.75 | 1 / 1 |
blood vessel | 100% | 3593.86 | 1329 / 1335 | 0% | 0 | 0 / 0 |
heart | 86% | 1599.07 | 744 / 861 | 0% | 0 | 0 / 0 |
muscle | 53% | 897.90 | 426 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 48% | 10.06 | 14 / 29 |
eye | 0% | 0 | 0 / 0 | 29% | 4.74 | 23 / 80 |
peripheral blood | 1% | 11.99 | 9 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007165 | Biological process | signal transduction |
GO_0007015 | Biological process | actin filament organization |
GO_0032956 | Biological process | regulation of actin cytoskeleton organization |
GO_0030036 | Biological process | actin cytoskeleton organization |
GO_0007155 | Biological process | cell adhesion |
GO_0016477 | Biological process | cell migration |
GO_0007264 | Biological process | small GTPase-mediated signal transduction |
GO_0000139 | Cellular component | Golgi membrane |
GO_0005829 | Cellular component | cytosol |
GO_0005886 | Cellular component | plasma membrane |
GO_0005925 | Cellular component | focal adhesion |
GO_0005525 | Molecular function | GTP binding |
GO_0019901 | Molecular function | protein kinase binding |
GO_0005515 | Molecular function | protein binding |
GO_0003924 | Molecular function | GTPase activity |
Gene name | RND3 |
Protein name | Rho-related GTP-binding protein RhoE (Protein MemB) (Rho family GTPase 3) (Rho-related GTP-binding protein Rho8) (Rnd3) Rho family GTPase 3 |
Synonyms | ARHE RHO8 RHOE |
Description | FUNCTION: Binds GTP but lacks intrinsic GTPase activity and is resistant to Rho-specific GTPase-activating proteins. |
Accessions | ENST00000439275.1 ENST00000409557.5 Q53RZ3 E9PFH1 ENST00000375734.6 ENST00000454202.5 ENST00000263895.9 P61587 |