Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 18 studies | 45% ± 22% | |
endothelial cell | 14 studies | 29% ± 12% | |
oligodendrocyte precursor cell | 10 studies | 35% ± 15% | |
GABAergic neuron | 9 studies | 47% ± 23% | |
glutamatergic neuron | 9 studies | 48% ± 26% | |
microglial cell | 9 studies | 23% ± 7% | |
mast cell | 9 studies | 24% ± 6% | |
oligodendrocyte | 9 studies | 26% ± 9% | |
macrophage | 7 studies | 27% ± 6% | |
dendritic cell | 7 studies | 19% ± 3% | |
interneuron | 6 studies | 47% ± 24% | |
fibroblast | 6 studies | 30% ± 7% | |
neuron | 5 studies | 31% ± 12% | |
adipocyte | 5 studies | 21% ± 6% | |
ciliated cell | 5 studies | 25% ± 7% | |
Mueller cell | 5 studies | 41% ± 11% | |
endothelial cell of lymphatic vessel | 5 studies | 25% ± 7% | |
granule cell | 4 studies | 28% ± 13% | |
epithelial cell | 4 studies | 43% ± 22% | |
cardiac muscle cell | 4 studies | 29% ± 1% | |
retina horizontal cell | 4 studies | 20% ± 6% | |
retinal rod cell | 4 studies | 18% ± 4% | |
T cell | 4 studies | 19% ± 3% | |
pericyte | 4 studies | 21% ± 3% | |
smooth muscle cell | 4 studies | 19% ± 2% | |
type I pneumocyte | 4 studies | 21% ± 6% | |
basal cell | 4 studies | 38% ± 25% | |
GABAergic interneuron | 3 studies | 33% ± 2% | |
amacrine cell | 3 studies | 18% ± 3% | |
glycinergic amacrine cell | 3 studies | 20% ± 3% | |
myeloid cell | 3 studies | 23% ± 3% | |
hepatocyte | 3 studies | 65% ± 18% | |
non-classical monocyte | 3 studies | 19% ± 3% | |
abnormal cell | 3 studies | 24% ± 8% | |
neural progenitor cell | 3 studies | 28% ± 9% | |
ependymal cell | 3 studies | 39% ± 20% | |
alveolar macrophage | 3 studies | 28% ± 8% | |
club cell | 3 studies | 25% ± 9% | |
monocyte | 3 studies | 29% ± 2% | |
respiratory goblet cell | 3 studies | 27% ± 13% | |
type II pneumocyte | 3 studies | 19% ± 4% | |
lymphocyte | 3 studies | 28% ± 7% | |
transit amplifying cell | 3 studies | 40% ± 34% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2260.62 | 1445 / 1445 | 100% | 19.80 | 183 / 183 |
breast | 100% | 2316.56 | 459 / 459 | 100% | 18.62 | 1117 / 1118 |
intestine | 100% | 2038.67 | 966 / 966 | 100% | 15.06 | 526 / 527 |
prostate | 100% | 2375.93 | 245 / 245 | 100% | 16.40 | 501 / 502 |
brain | 100% | 3795.83 | 2634 / 2642 | 100% | 19.76 | 705 / 705 |
lung | 100% | 1871.52 | 576 / 578 | 100% | 16.89 | 1155 / 1155 |
stomach | 100% | 1836.55 | 359 / 359 | 100% | 14.52 | 285 / 286 |
bladder | 100% | 2484.19 | 21 / 21 | 99% | 14.39 | 501 / 504 |
uterus | 100% | 3254.31 | 170 / 170 | 99% | 15.60 | 456 / 459 |
thymus | 100% | 2337.51 | 653 / 653 | 99% | 15.01 | 601 / 605 |
ovary | 100% | 2651.81 | 180 / 180 | 99% | 13.12 | 427 / 430 |
pancreas | 100% | 1331.14 | 327 / 328 | 99% | 10.77 | 177 / 178 |
skin | 100% | 3615.33 | 1809 / 1809 | 97% | 10.42 | 460 / 472 |
kidney | 100% | 1977.55 | 89 / 89 | 95% | 8.06 | 853 / 901 |
adrenal gland | 100% | 1423.62 | 258 / 258 | 94% | 9.89 | 217 / 230 |
liver | 100% | 1870.23 | 226 / 226 | 84% | 5.60 | 343 / 406 |
adipose | 100% | 1818.26 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 2708.31 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 17.83 | 45 / 45 |
blood vessel | 100% | 1609.54 | 1331 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 1213.19 | 792 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 12.14 | 28 / 29 |
heart | 97% | 1822.02 | 831 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 93% | 7.71 | 74 / 80 |
peripheral blood | 84% | 1425.87 | 779 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0016197 | Biological process | endosomal transport |
GO_0006897 | Biological process | endocytosis |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0005905 | Cellular component | clathrin-coated pit |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005886 | Cellular component | plasma membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0005509 | Molecular function | calcium ion binding |
GO_0005515 | Molecular function | protein binding |
GO_0017124 | Molecular function | SH3 domain binding |
Gene name | REPS1 |
Protein name | RalBP1-associated Eps domain-containing protein 1 (RalBP1-interacting protein 1) RALBP1 associated Eps domain containing 1 |
Synonyms | |
Description | FUNCTION: May coordinate the cellular actions of activated EGF receptors and Ral-GTPases. . |
Accessions | ENST00000626459.2 H0YDT0 ENST00000431346.6 H0YCF0 ENST00000367663.8 [Q96D71-4] H7C1V2 ENST00000526022.1 E9PMG1 ENST00000258062.9 [Q96D71-3] ENST00000409812.6 [Q96D71-2] ENST00000530575.1 Q96D71 H0YE89 ENST00000450536.7 [Q96D71-1] H0YCR2 ENST00000415951.6 ENST00000414243.1 F2Z3L2 H0YE73 ENST00000445570.5 H7C225 ENST00000483468.5 ENST00000530255.1 ENST00000529597.5 ENST00000478483.6 |