Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 35 studies | 28% ± 11% | |
endothelial cell of lymphatic vessel | 19 studies | 35% ± 10% | |
smooth muscle cell | 19 studies | 20% ± 3% | |
pericyte | 18 studies | 23% ± 7% | |
fibroblast | 14 studies | 25% ± 8% | |
oligodendrocyte | 13 studies | 38% ± 12% | |
capillary endothelial cell | 11 studies | 24% ± 5% | |
club cell | 10 studies | 25% ± 8% | |
astrocyte | 10 studies | 28% ± 13% | |
endothelial cell of artery | 10 studies | 21% ± 4% | |
epithelial cell | 10 studies | 37% ± 16% | |
oligodendrocyte precursor cell | 10 studies | 33% ± 14% | |
macrophage | 9 studies | 21% ± 6% | |
secretory cell | 8 studies | 35% ± 13% | |
adipocyte | 8 studies | 24% ± 5% | |
endothelial cell of vascular tree | 8 studies | 23% ± 11% | |
respiratory goblet cell | 7 studies | 31% ± 13% | |
glutamatergic neuron | 7 studies | 43% ± 21% | |
basal cell | 7 studies | 31% ± 15% | |
ciliated cell | 7 studies | 27% ± 15% | |
alveolar macrophage | 7 studies | 21% ± 7% | |
type I pneumocyte | 7 studies | 22% ± 5% | |
GABAergic neuron | 6 studies | 31% ± 12% | |
dendritic cell | 6 studies | 21% ± 6% | |
type II pneumocyte | 6 studies | 24% ± 3% | |
microglial cell | 5 studies | 23% ± 7% | |
myeloid cell | 5 studies | 23% ± 6% | |
enterocyte | 5 studies | 24% ± 4% | |
cardiac muscle cell | 5 studies | 24% ± 4% | |
vein endothelial cell | 5 studies | 22% ± 8% | |
connective tissue cell | 5 studies | 25% ± 10% | |
goblet cell | 5 studies | 32% ± 24% | |
myofibroblast cell | 5 studies | 20% ± 4% | |
duct epithelial cell | 4 studies | 27% ± 12% | |
conventional dendritic cell | 4 studies | 29% ± 19% | |
neuron | 4 studies | 29% ± 15% | |
retinal cone cell | 4 studies | 20% ± 3% | |
mucus secreting cell | 4 studies | 21% ± 2% | |
retinal rod cell | 4 studies | 21% ± 3% | |
abnormal cell | 4 studies | 20% ± 6% | |
squamous epithelial cell | 3 studies | 41% ± 25% | |
pancreatic A cell | 3 studies | 41% ± 8% | |
non-classical monocyte | 3 studies | 22% ± 5% | |
glomerular endothelial cell | 3 studies | 23% ± 1% | |
retinal pigment epithelial cell | 3 studies | 32% ± 11% | |
lymphocyte | 3 studies | 24% ± 7% | |
retina horizontal cell | 3 studies | 21% ± 3% | |
luminal hormone-sensing cell of mammary gland | 3 studies | 17% ± 3% | |
monocyte | 3 studies | 22% ± 3% | |
enteroendocrine cell | 3 studies | 26% ± 5% | |
group 3 innate lymphoid cell | 3 studies | 30% ± 13% | |
interneuron | 3 studies | 40% ± 11% | |
luminal cell of prostate epithelium | 3 studies | 28% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3184.20 | 1444 / 1445 | 100% | 56.24 | 183 / 183 |
breast | 100% | 3404.64 | 459 / 459 | 100% | 53.96 | 1117 / 1118 |
lung | 100% | 3114.76 | 576 / 578 | 100% | 54.30 | 1154 / 1155 |
prostate | 100% | 2614.05 | 244 / 245 | 99% | 54.87 | 499 / 502 |
ovary | 99% | 1675.61 | 179 / 180 | 100% | 33.07 | 428 / 430 |
uterus | 100% | 3185.83 | 170 / 170 | 98% | 41.17 | 452 / 459 |
bladder | 100% | 2946.19 | 21 / 21 | 98% | 38.95 | 496 / 504 |
stomach | 100% | 2410.41 | 359 / 359 | 98% | 38.41 | 279 / 286 |
intestine | 100% | 3355.31 | 965 / 966 | 98% | 33.62 | 514 / 527 |
brain | 97% | 2174.69 | 2569 / 2642 | 100% | 38.25 | 702 / 705 |
thymus | 100% | 2806.47 | 652 / 653 | 97% | 49.43 | 585 / 605 |
adrenal gland | 100% | 2794.45 | 258 / 258 | 94% | 27.96 | 217 / 230 |
kidney | 99% | 1577.04 | 88 / 89 | 95% | 32.86 | 854 / 901 |
liver | 100% | 1691.29 | 226 / 226 | 93% | 19.78 | 377 / 406 |
pancreas | 93% | 1036.50 | 305 / 328 | 98% | 52.26 | 174 / 178 |
skin | 100% | 3468.54 | 1806 / 1809 | 90% | 26.04 | 423 / 472 |
adipose | 100% | 3589.19 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 4998.88 | 1335 / 1335 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 13.11 | 1 / 1 |
spleen | 100% | 1328.17 | 240 / 241 | 0% | 0 | 0 / 0 |
heart | 98% | 1501.70 | 846 / 861 | 0% | 0 | 0 / 0 |
muscle | 97% | 1029.88 | 777 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 91% | 30.01 | 41 / 45 |
lymph node | 0% | 0 | 0 / 0 | 76% | 12.50 | 22 / 29 |
peripheral blood | 40% | 608.55 | 371 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 38% | 5.25 | 30 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0071786 | Biological process | endoplasmic reticulum tubular network organization |
GO_0051301 | Biological process | cell division |
GO_0006998 | Biological process | nuclear envelope organization |
GO_0007084 | Biological process | mitotic nuclear membrane reassembly |
GO_0071782 | Cellular component | endoplasmic reticulum tubular network |
GO_0005881 | Cellular component | cytoplasmic microtubule |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0005515 | Molecular function | protein binding |
GO_0008017 | Molecular function | microtubule binding |
Gene name | REEP3 |
Protein name | Receptor expression-enhancing protein Receptor expression-enhancing protein 3 Receptor accessory protein 3 isoform C REEP3 protein |
Synonyms | C10orf74 hCG_1812775 |
Description | FUNCTION: Microtubule-binding protein required to ensure proper cell division and nuclear envelope reassembly by sequestering the endoplasmic reticulum away from chromosomes during mitosis. Probably acts by clearing the endoplasmic reticulum membrane from metaphase chromosomes. . FUNCTION: Microtubule-binding protein required to ensure proper cell division and nuclear envelope reassembly by sequestering the endoplasmic reticulum away from chromosomes during mitosis. Probably acts by clearing the endoplasmic reticulum membrane from metaphase chromosomes. . FUNCTION: Microtubule-binding protein required to ensure proper cell division and nuclear envelope reassembly by sequestering the endoplasmic reticulum away from chromosomes during mitosis. Probably acts by clearing the endoplasmic reticulum membrane from metaphase chromosomes. . FUNCTION: Microtubule-binding protein required to ensure proper cell division and nuclear envelope reassembly by sequestering the endoplasmic reticulum away from chromosomes during mitosis. Probably acts by clearing the endoplasmic reticulum membrane from metaphase chromosomes. . |
Accessions | Q6NUK4 Q8WV73 ENST00000373758.5 [Q6NUK4-1] X5D7U8 X5DR89 X5DP57 ENST00000634963.1 A0A0U1RR85 |